| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1144 |
|---|
| Symbol | |
|---|
| ID | 5385463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1343996 |
|---|
| End bp | 1344643 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640864120 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001400125 |
|---|
| Protein GI | 153948296 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01545] haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAAC CGCAATCAGC CGGGGCGAAA CGCATTATCT TCTTTGATTT AGATGGCACG
TTACATCAAC AGGATATGTT CGGCAGTTTT TTGCGTTTTC TATTACGCCA CTTGCCGCTT
AATCTGTTAC TGGTTATCCC GTTGCTACCA CTGATTGGCG TAGGGCTCCT GGTGGGGGGG
CGTTGTGCAC GTTGGCCGAT GAGCCTTTTG TTGTGGGCGA TGACTTTTGG GCGACGGGAA
GCACATCTGC GCGACCTGGA GTGGCGCTTT GTGGCCGCAT TTCGCCAAAA AGTGACTGAA
TTCCCCGTGG TTGCTATGCG CTTACGCCAG TATCTGGAAA GCAGCGATGC AGAGGTGTGG
TTAATCACCG GCTCCCCACA GCGGCTGGTC GAACAGGTTT ACCATGATTC AAACTTTATA
CACCGCTTAC GGTTGATAGG TAGCCGTATG GAACGGCGCA ATGGGGGATG GGTGTTGCCA
CTGCGCTGTT TAGGGCCTGA AAAAGTGGTG CAATTAGAAC AGCGTCTGGG GTCTCCACTG
AAGTTATATA GTGGGTACAG CGACAGTAAG CAGGATAATC CGCTGTTAGC TTTTTGCGAA
CACCGCTGGC GGGTAAGTAA AACCGGCGAA TTACAGCAAT TGGAGTAG
|
|---|
| Protein sequence | MVEPQSAGAK RIIFFDLDGT LHQQDMFGSF LRFLLRHLPL NLLLVIPLLP LIGVGLLVGG
RCARWPMSLL LWAMTFGRRE AHLRDLEWRF VAAFRQKVTE FPVVAMRLRQ YLESSDAEVW
LITGSPQRLV EQVYHDSNFI HRLRLIGSRM ERRNGGWVLP LRCLGPEKVV QLEQRLGSPL
KLYSGYSDSK QDNPLLAFCE HRWRVSKTGE LQQLE
|
|---|
| |