Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1094 |
Symbol | chbR |
ID | 5385369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 1296765 |
End bp | 1297595 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640864070 |
Product | DNA-binding transcriptional regulator ChbR |
Protein accession | YP_001400075 |
Protein GI | 153950456 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000146314 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTCA GATTAGTACG TGAAAGAGAC TTTTTTAACG GTAAAGAATT CCATCTGTTT ATTTACAACA AAACGGAGAG TGCGACCGGT TTACATCAGC ATGATTATTA TGAATATACG CTGATATTAA CCGGGATGTG CTACCAGGAA ATTAACGGAA AGCGTGTTTT TTTGGAGCGT GGGGACTTTA TCTTTATTCC TCTTGGTTCT CATCATCAAA GTTTCTATGA GTTTGGTGCC ACCCGGATCC TGAATGTCGG GATCAGTAAA GCTTTCTTTG AAGAACATTA TTTCCATTTA CTGTCTCGGC CTATTGTGGC CTCTCAGGCG TATCGCTTAA GAGGTGATTT TCTTTCCTAT ATCGAATCGG CGATCTCTGC TCCACACTAC AGAGAAAATG AGCAAACAGA ACTTTTAGAG CTACTGACTT TTTATGTGAC TAACCGCATC AGTCATTACA AAGAGAGTGA AGTTAACGAC GATATACCTT CGTGGCTGAA GGCCACAATC GACAAAATGC ATGATAACGC GATGTTTAGT GAGAAGGCGT TGGTGAATAT GGTCGAGCTT TCTGGCAAAA CCCAAGAATA TCTCACCAGA GCGACACGGC GCTATTATCA GAAAACGCCC ATGCAGATTA TCAATGAAAT TAGAATAAAT TTTGCCAAAA CCCAACTTGA AGTGACGAAC TATTTAGTTT CGGATATTGC ATTTGAAGCA GGCTACAGCG ACACCACGTT ATTCATCAAA AACTTCAAAA AATTAACCTC TTTTACGCCA GGAAACTATC GCAAGAACTT CTACAGCGCC AGAGAGAGTT TATCCCATTA G
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Protein sequence | MDVRLVRERD FFNGKEFHLF IYNKTESATG LHQHDYYEYT LILTGMCYQE INGKRVFLER GDFIFIPLGS HHQSFYEFGA TRILNVGISK AFFEEHYFHL LSRPIVASQA YRLRGDFLSY IESAISAPHY RENEQTELLE LLTFYVTNRI SHYKESEVND DIPSWLKATI DKMHDNAMFS EKALVNMVEL SGKTQEYLTR ATRRYYQKTP MQIINEIRIN FAKTQLEVTN YLVSDIAFEA GYSDTTLFIK NFKKLTSFTP GNYRKNFYSA RESLSH
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