| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0805 |
|---|
| Symbol | |
|---|
| ID | 5384351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 965818 |
|---|
| End bp | 967215 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640863768 |
|---|
| Product | ImpA domain-containing protein |
|---|
| Protein accession | YP_001399789 |
|---|
| Protein GI | 153950380 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACACT TACCTGAACG CCACCTGAAA ACCGGCGGCG ACCCCCGCCA TTTTGCTGAA
TTCAGCGCCT TACGTAACGA AATCGGTAAA TTACACCATC CCGCCCGCCC GGATGTTGAC
TGGACGAGGG TCGAGCAGCT TTGTCTCGCA CTGTTTCGCC AGAATGGCGT TGAGCTACAG
ACCACGGTTG ATTTTACGCT GGCTCGGACG CACGTTGCTG GGCTGGCCGG GTTATGTGAG
GGGCTGGAAC TGCTGGCGGG ATTGCTCTCT CATCAATGGA GCACCTTGTG GCCGCCGCAA
ACCCATGCGC GGGTGGAGTT ACTGGCTTGG CTGAGTGACC GATTGCAACA GGTCTGGCGT
ACCATGACCC TGTGCTACGG TGATCTGGCG CTGGTTTACC GTGCTGAGCA GGCGCTGGAA
CAACTCTGCA CGCAACTGCA AACGTTGGAA CTCAAGCATC TGAGTAAACT GGACGGTGTT
CGCCTCATGT TGCATAACGC CGCATTGCGG CTAGAGAGTG CCGAAGCGGG CGCTGATACA
CCCGACCGAT TGACTGTGCC AATACGGCAC GCCGAGCTCT CGGAACCACA ACCCACCTTC
GTGTCGGCCA CAGCCAGTGT TCCGCTGGTC TATATTGTCA ACGAACCGGC TCCGCCGAGT
GTACAGGTGG CTTTAGCCCC ACCTGAGCCG CCACCCCCTC CGCGCTGGAA AGTCGGGCAC
GGTTTTATTG CCGGGTTATT GTTGATGGCG GTGCTGATGA CGGGCGGTTT TGCTATCTGG
CAGTCACTCT CATCCGATCC GTTGCGGGAG GCATTACTCG CCAATGCCAG CCCTTTACCC
ACACTGCTGA CGGCTAAATC AATCAATGAA CTGCAAAAGC AGACCTCAGA CGCCGAACTG
GGACGTTTGG CTGAACCCGT GCTGCAAGCC AGTGGCTCAC AGTTAGAACA ATTGGCGATA
TTGCCACCGT TATGGGCGCA AATACGGGGT GATGCACTGT TATCACAAGC ACAACAATTG
TGGCCCGCCA GCCAAGACGT TAAGCGTTTG AGCACATTGT GGCAGCAACA ACGAGAGGCT
GGAGCCGCCC CGCTGGGGGA GTTGAAACAC TATGCACTGG CGCAAGAGCG CCTACGGCAA
CTGGCCGATC GCCTAAATGG ATTGGATGAG AAAAAGGGGC GCTATATGAC GGTCTCGGAG
CTGAAAACGG TGGTCTTTGC GATACAACAA CCGCTGGCAA AAACCTTACC GCTGGAAGAG
TTGCTGCGGC AGTATCAGGC ACAGTCCGAG TCAGGGCAAA CTCCATCTTC AGCACTGCGC
CAACAGATTG ACAGCCGGTT TACTCAACTG CTGAACCGGT ATGCGTTACT CACGTTGCCC
GAAACGGCAT CGCCGTAG
|
|---|
| Protein sequence | MTHLPERHLK TGGDPRHFAE FSALRNEIGK LHHPARPDVD WTRVEQLCLA LFRQNGVELQ
TTVDFTLART HVAGLAGLCE GLELLAGLLS HQWSTLWPPQ THARVELLAW LSDRLQQVWR
TMTLCYGDLA LVYRAEQALE QLCTQLQTLE LKHLSKLDGV RLMLHNAALR LESAEAGADT
PDRLTVPIRH AELSEPQPTF VSATASVPLV YIVNEPAPPS VQVALAPPEP PPPPRWKVGH
GFIAGLLLMA VLMTGGFAIW QSLSSDPLRE ALLANASPLP TLLTAKSINE LQKQTSDAEL
GRLAEPVLQA SGSQLEQLAI LPPLWAQIRG DALLSQAQQL WPASQDVKRL STLWQQQREA
GAAPLGELKH YALAQERLRQ LADRLNGLDE KKGRYMTVSE LKTVVFAIQQ PLAKTLPLEE
LLRQYQAQSE SGQTPSSALR QQIDSRFTQL LNRYALLTLP ETASP
|
|---|
| |