Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0641 |
Symbol | flgD |
ID | 5388422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 749359 |
End bp | 750015 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640863612 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001399633 |
Protein GI | 153948005 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATTA ATGAAAGCAG AAATTCAGCC AATGTTGGCA ATCAATCCCT AGCACCTGAA GGTGGCCTGC CGGGAGGGGA GCAGTTAAAT AACCAATTTA TGACCTTGTT GGTGGCACAG ATTAAGAATC AAGACCCACT GAACCCGGCA GATGGCACCG AGTTTGTCAG CCAAATGGCG CAACTCTCGC AGGTACAAGC CACGGAGAAC ATGGCAAAGC TGCTCAAGAG CAATACTGTT CAGATGGCGA AAATGCAGAC CATGGCAACG GCCAATTTGG TCGGGCAGCA GGTGATGGTT GAGAGTAATG AAATGACCTT AGGTAAAGAC CGTGTTGCCG GACGCTTAAC GCTGAAACAG CCCGCCCCGA CGCTGTTATT GCACATTACT GACATGTTGG GCCAAAAAAA GGTTATCGAT TTGGGTAAAC AACCGGCGGG CCCGGTGAAT TTCACTCTTG ACCCGGCAGC GGCCAAGCTC CAACCCGGCC AATACCAACT GAGTGCCGTC AGTGGCAGTG GGGAAGAACT GATTCCGCTG GAAGTAGCAG GCAAAGTGAA CAACGTGCGT ATTTCACCAC AAGGTGGTGC ACCGCAACTG AATATTGCCG GCCTTGGCGA GGTTTCATAC AGCCAAATCA CACAATTCGG GGCCTAG
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Protein sequence | MQINESRNSA NVGNQSLAPE GGLPGGEQLN NQFMTLLVAQ IKNQDPLNPA DGTEFVSQMA QLSQVQATEN MAKLLKSNTV QMAKMQTMAT ANLVGQQVMV ESNEMTLGKD RVAGRLTLKQ PAPTLLLHIT DMLGQKKVID LGKQPAGPVN FTLDPAAAKL QPGQYQLSAV SGSGEELIPL EVAGKVNNVR ISPQGGAPQL NIAGLGEVSY SQITQFGA
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