Gene YpsIP31758_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0565 
Symbol 
ID5384772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp666055 
End bp667305 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content53% 
IMG OID640863537 
Productinner membrane protein YjeH 
Protein accessionYP_001399558 
Protein GI153949083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTGGGT TAAAGCAAGA GTTAAGTCTG GCGCAAGGCG TTGGGTTGTT ATCCACTTCC 
CTGTTGGGGA CGGGGGTTTT TGCTGTGCCA GCATTGGCGG CAATGTTGGC GGGCCATGAT
AGTTTATGGG CCTGGCCAGT ATTAATCGTA CTGGTCTTCC CAATCGCTAT CGCCTTTGCG
GCGCTGGGGC GTCATTTCCC CAGTGCAGGG GGGGCAGCAC ACTTTGTTGC CATCGCTTTT
GGTCCGAAAC TGGGTAAAGT CACGGGCTGG CTATTTTTAT CGGTTATTCC GGTCGGGCTG
CCTGCGGCCT TGCAAATAGC GGCCGGATTC TGGCAAGCGA TGTTTGGTTG GAGTGACACC
GGGTTGCTAA TGGTGCAACT GGTGACCTTG CTGGTTATCT GGCTACTGGG CACCCGTAGC
GCCGGTTCAA GTGCCAATCT ACAAACCGTG ATTGCACTAC TGGTAATAGC GTTGGTGGCC
GCAATTTGGT GGCAGGGGGA TATCCGCCTA TCGCAGATCC CATGGCCAGC GCTACAAGAT
GTTTCCCCAC CCAATATATT CAACGCGTTA GCCGTGATGT TCTGGTGTTT TGTTGGTTTA
GAGGCTTTTG CTCATTTGGC AACGGAATTT CGTCATCCTG AGCGTGACTT CCCACGGGCC
TTGATCGTCG GGTTATTGGT TGCTGGTGCG GTTTATTGGG GGTGTACTGT CGCGGTGCTG
CATTTTCAGG CTTATGGTGA GTCGCAGGCT GCCGCGGCTT CACTGCCGGG GATCGTGGTA
CAACTGTTTG GTGAACATGC GCTGTGGATT GCCTGCATTA TTGGCTATCT GGCCTGTTTT
GCCAGCGTGA ATATTTATAC TCAAAGTTTT GCTCGCATGG TGTGGTCGCA GTCTCAGGTT
CGTCCACAAA GTAAACTGGC GCGTTTATCT GCCGGTCAAA CGCCAGTTAA TGCGCTGACC
GCTGTGGTCG GCAGTTGTCT GGTCTTCGCG CTGCTAATCT ACTGGCTTGC TTTGCCACTG
GATTTACTGA TTGTGTATGC CAACGGTATT TTCGTGCTGA TTTACTTGCT GTGTATGCTG
GCAGGGATCC GCTTATTGAG TGGACGCGCG CGGGTGATGT CAGTGATTGG CAGTCTTCTC
TGCTGTGTAT TACTGGTCAT GATTGGCTGG AAAAGTGTAT ACGCTTTGCT GATGTTTGCG
CTGTTGTGGA TGTTGATGTC TAAGCCAAAG ACGCAGCTAA CTCAGCCTTA A
 
Protein sequence
MGGLKQELSL AQGVGLLSTS LLGTGVFAVP ALAAMLAGHD SLWAWPVLIV LVFPIAIAFA 
ALGRHFPSAG GAAHFVAIAF GPKLGKVTGW LFLSVIPVGL PAALQIAAGF WQAMFGWSDT
GLLMVQLVTL LVIWLLGTRS AGSSANLQTV IALLVIALVA AIWWQGDIRL SQIPWPALQD
VSPPNIFNAL AVMFWCFVGL EAFAHLATEF RHPERDFPRA LIVGLLVAGA VYWGCTVAVL
HFQAYGESQA AAASLPGIVV QLFGEHALWI ACIIGYLACF ASVNIYTQSF ARMVWSQSQV
RPQSKLARLS AGQTPVNALT AVVGSCLVFA LLIYWLALPL DLLIVYANGI FVLIYLLCML
AGIRLLSGRA RVMSVIGSLL CCVLLVMIGW KSVYALLMFA LLWMLMSKPK TQLTQP