| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0253 |
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| Symbol | |
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| ID | 5388015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 281417 |
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| End bp | 282103 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863219 |
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| Product | hypothetical protein |
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| Protein accession | YP_001399250 |
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| Protein GI | 153946896 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACC TTTATTCGAT ACTCAGCATC GCGCTGTTAC TGGCCCCTGG TACTGCCACT
TACGGACAAC TGCTTGCTAC CCCCACCCGT ATTGCGGTAG AGGCACAAGA GCAGAAGCGA
ACCGTACAGG TGTATAACAG CGGCGATACA CCGCTTTATC TGGATATCAC ATTACAACGT
GTGGATAACC CAGGCGTGAA CCCCGAGCGT AAAACACCCA TCAGTGAAAT CTCTCAGCCT
GAAATGATTT TTAATCCTAA CCGCATTACG TTAGGGCCGA GACAAAAGCG GGATATTACG
CTTATCCCAC TCAAATCGCC GGTACAGGAA ACCCTTTACC GCCTGTATAT CAACCCCGTG
CTCAATATCA AAGCGGTTGG CGATGGGGAG GATAAAAGTA AAGTTCATGC CCCAATGACC
ATCAGTATTG GTTATGGCGT GCTGATTCAT CATTTGCCAC CGGCTGCTGC ACAAACTCGT
CATTGGCAAC ATCAATGCTC AGCTACTGGC GAGCTAACAC TCACCGCTAC CGGAACGGTG
CACAGTAAGT TTAAGCAGCT CGAATCGGGC GGTAACCCCG CACTGGTCGA CAGTCTAAAT
CTGTATCCGG GCACCGCGCT CACACTGCCC TTCAAACAAC TCAATGGTGA GGTGGACGGT
GAAAAATTTA GTCTTCGCTG CCATTAG
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| Protein sequence | MKYLYSILSI ALLLAPGTAT YGQLLATPTR IAVEAQEQKR TVQVYNSGDT PLYLDITLQR
VDNPGVNPER KTPISEISQP EMIFNPNRIT LGPRQKRDIT LIPLKSPVQE TLYRLYINPV
LNIKAVGDGE DKSKVHAPMT ISIGYGVLIH HLPPAAAQTR HWQHQCSATG ELTLTATGTV
HSKFKQLESG GNPALVDSLN LYPGTALTLP FKQLNGEVDG EKFSLRCH
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