| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0238 |
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| Symbol | rsmD |
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| ID | 5388234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 266780 |
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| End bp | 267442 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863204 |
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| Product | 16S rRNA m(2)G966-methyltransferase |
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| Protein accession | YP_001399235 |
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| Protein GI | 153949858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.17895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGC AACCTATAGC AAAGCGTTCT ATAGTAAAAA AAGCATCACC GCAGTCAGCG
GGGCAGATAA GAATCATTGG CGGCAAGTGG CGTGGGCGTA AACTCCCCGT TCCAGATAGC
CCAGGGCTGC GCCCCACGAC GGACCGGGTA AGGGAAACAT TATTTAACTG GCTCGCTCCG
ATGATTCAGG GTGCTCGCTG TCTGGATTGT TTTGCGGGCA GTGGTGCGTT AGGGCTGGAA
GCACTATCCC GTTATGCAAG CGAAACTACC TTGCTGGAAG CTGATCGTCA GGTTGCCAAA
CAACTGAGCG ACAACCTAAC GCTACTAAAA GCTGAAAATG GGCAAGTTGT AAACACCAAC
TCATTACAAT GGTTGGCGCA ACCGGGGCAG CCTTTCAATT TGGTATTTCT GGATCCGCCT
TTTCGTAAAG GCCTACTGGC TGAAACCATT AATTTGCTAG AGCAATTTAA CTGGCTGGCT
GCTGATGCCT GGATCTATGT TGAAGCGGAG GCAGAAAGCG CCGTTGCTGA TGTCCCCGCC
AATTGGCTGT TACATCGAGA AAAAATCGCC GGGCAGGTTG CCTATCGTTT ATTTATTCGC
CAACAAACCG ATTTGCCAGC ATGTGCATCG GTGGCAGAGC AGGAGCAACA CCATGTGGAT
TAA
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| Protein sequence | MAKQPIAKRS IVKKASPQSA GQIRIIGGKW RGRKLPVPDS PGLRPTTDRV RETLFNWLAP
MIQGARCLDC FAGSGALGLE ALSRYASETT LLEADRQVAK QLSDNLTLLK AENGQVVNTN
SLQWLAQPGQ PFNLVFLDPP FRKGLLAETI NLLEQFNWLA ADAWIYVEAE AESAVADVPA
NWLLHREKIA GQVAYRLFIR QQTDLPACAS VAEQEQHHVD
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