Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | JJD26997_1552 |
Symbol | aroE |
ID | 5389045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. doylei 269.97 |
Kingdom | Bacteria |
Replicon accession | NC_009707 |
Strand | - |
Start bp | 1372522 |
End bp | 1373310 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640862492 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001398553 |
Protein GI | 153952221 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTT TGGCAGTTAT AGGCGATCCT ATTTCTCACT CTAAATCGCC TAGAATGCAC AATAATGCTA TTAAAGCTTT AGGGCTCGAT AGCATTTATA CACGCTATCA TTTAAGAAAT GCTAACTGTT TAAGAGAAGA TTTTTTTAAA TTAGGACTTA GTGGAGCTAA TATTACTTTG CCTTTTAAGG AAAAAGCTTT AGATATTGCT GATGTGAAGG ATGATTTTGC TAGAAATATT GGCTCTGCGA ATACTTTATG TTTAAAAGAA GATGAAATTT ACGCTTATAA TACCGATGCT TTAGGTTTTT TAGAAGCTAT TAAGGATTTT GATAATGTAA AAAAAGCTTT GATTTTGGGT GCTGGAGGTA CAGCTTTGGC ACTTGCTTAT GCATTAAAAC AAAAAGGCGT AGAAGTGTAT ATAGCTAATC GTAGCAAAGA AAGATTTAAA GATTTTTTAG CTTATCCAAC TTATCTTTAT AAAGACTTGC AAGATTTTGA CTTTGATTTG GTTGTAAATT CAACTTCTGC TGGATTAAAA GATGAAAATT TACCTTGTAA TAGAGAGCTT TTAGATAGAA TTTTACCTAA AGCCAAATTT GCTTTTGAGG TAATTTATGG CAGAGAAACA CCTTTTTATA GATTATGTAA AGAATATCAT TTAAAAATTA AAGATGGACT TGATATGCTT TTATGGCAAG GGGTTTTTGC TTTTGAACTT TTTTTTGAAA TACGAGATAA AAGGGAGATG ATAAAAAATG CAATGCAACA AGCATTGATT TTAAAGTAA
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Protein sequence | MKFLAVIGDP ISHSKSPRMH NNAIKALGLD SIYTRYHLRN ANCLREDFFK LGLSGANITL PFKEKALDIA DVKDDFARNI GSANTLCLKE DEIYAYNTDA LGFLEAIKDF DNVKKALILG AGGTALALAY ALKQKGVEVY IANRSKERFK DFLAYPTYLY KDLQDFDFDL VVNSTSAGLK DENLPCNREL LDRILPKAKF AFEVIYGRET PFYRLCKEYH LKIKDGLDML LWQGVFAFEL FFEIRDKREM IKNAMQQALI LK
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