Gene JJD26997_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_1552 
SymbolaroE 
ID5389045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp1372522 
End bp1373310 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content30% 
IMG OID640862492 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001398553 
Protein GI153952221 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT TGGCAGTTAT AGGCGATCCT ATTTCTCACT CTAAATCGCC TAGAATGCAC 
AATAATGCTA TTAAAGCTTT AGGGCTCGAT AGCATTTATA CACGCTATCA TTTAAGAAAT
GCTAACTGTT TAAGAGAAGA TTTTTTTAAA TTAGGACTTA GTGGAGCTAA TATTACTTTG
CCTTTTAAGG AAAAAGCTTT AGATATTGCT GATGTGAAGG ATGATTTTGC TAGAAATATT
GGCTCTGCGA ATACTTTATG TTTAAAAGAA GATGAAATTT ACGCTTATAA TACCGATGCT
TTAGGTTTTT TAGAAGCTAT TAAGGATTTT GATAATGTAA AAAAAGCTTT GATTTTGGGT
GCTGGAGGTA CAGCTTTGGC ACTTGCTTAT GCATTAAAAC AAAAAGGCGT AGAAGTGTAT
ATAGCTAATC GTAGCAAAGA AAGATTTAAA GATTTTTTAG CTTATCCAAC TTATCTTTAT
AAAGACTTGC AAGATTTTGA CTTTGATTTG GTTGTAAATT CAACTTCTGC TGGATTAAAA
GATGAAAATT TACCTTGTAA TAGAGAGCTT TTAGATAGAA TTTTACCTAA AGCCAAATTT
GCTTTTGAGG TAATTTATGG CAGAGAAACA CCTTTTTATA GATTATGTAA AGAATATCAT
TTAAAAATTA AAGATGGACT TGATATGCTT TTATGGCAAG GGGTTTTTGC TTTTGAACTT
TTTTTTGAAA TACGAGATAA AAGGGAGATG ATAAAAAATG CAATGCAACA AGCATTGATT
TTAAAGTAA
 
Protein sequence
MKFLAVIGDP ISHSKSPRMH NNAIKALGLD SIYTRYHLRN ANCLREDFFK LGLSGANITL 
PFKEKALDIA DVKDDFARNI GSANTLCLKE DEIYAYNTDA LGFLEAIKDF DNVKKALILG
AGGTALALAY ALKQKGVEVY IANRSKERFK DFLAYPTYLY KDLQDFDFDL VVNSTSAGLK
DENLPCNREL LDRILPKAKF AFEVIYGRET PFYRLCKEYH LKIKDGLDML LWQGVFAFEL
FFEIRDKREM IKNAMQQALI LK