Gene JJD26997_0751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJJD26997_0751 
Symbol 
ID5388939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. doylei 269.97 
KingdomBacteria 
Replicon accessionNC_009707 
Strand
Start bp674866 
End bp676125 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content28% 
IMG OID640861793 
Productputative outer membrane component of efflux system 
Protein accessionYP_001397887 
Protein GI153951625 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA TAAATATTAT TTTATTTCTA CCTTTGGTAT TGTTCGGATC TAACCTAAAA 
GAACTTATAA ATTTAAGTCA AAAAAACGAA CAATATCTTA TCAAACAAAT TCAAATCGAA
CAAGCTAAAC TTACAAGTAA AGAAGCTTTT AGAAATTACC TACCCTCTCT TAGTCTAAAC
TCAGCTTATG TAGCCAACAA TAAAGATCGC TTCATTATCG ATCCACAAGA AAGTTTATTT
GCTAAAGTTT CTCTTCATTT TTTACTTTTT GATGGGGGTG CTAGAGAGGC CAATTTAAGA
GCTTTAGAAA GCAGAGAAAA ATTAAGCCTT TTAGACAAAG AACAAAATAA AAATTACCTT
GCCCTAAATG CAATCACACT TTATTTTAAC ACCTTAAGTC TTGAAAAAAT TTTACTAGCC
AATCAACAAA AAATAGCTTT TTTAAAATCA ACTTTTGAAA GATTGCAAAA ATTTTATGAT
GCAGGACTTA GCCCTAAAGA TGAACTTGAA AGCATTAAAG CCAAATACCA TTTAAGCTTA
CTAGAGCTCA GTCAAAATGA ATTAAAACTT GCCAATATAC AAAAAGAGAT TAAAATTTTA
AGCAATACAG ATTTTAAAGT GCAAGGGAAT GCTTTTTTAG AAAATCCGCA ACAAGAAAAA
AGTCAAAACT ATGAAGTAAT GATAGCTAAA GAACAAATCA GTCTTGCTAA AGAAAGTGTA
AATTTAGCAA AAGCTGAATA TTTTCCAAAA TTTTATATTC AAGATAATTT TAACTTTTAT
AAAAACAATT ACAATCCAAA AGTTCCAGCT CCTTTTGTAA ATTTAGCGGA TCAATTCTTA
GAAAAATATT CTCAAGGTAA TCAATTTATT TTAGGTATGG AATGGAAAAT TTTTGATTTC
AATGCAAGGG CTAAAGAAGT TGAAAAAGAG CGTTTAAATG TTCAGATAGC CAATGCAAAT
GCAAGATTGA GTGAGCGAAA AAATAAAGAA GAATTAAATT ATTTAGACAA AAGTTTAAAA
GTTTTACAAG AACAAATTTT AGCTCTTAAT CTTAGCTTAA ATGCTGCAAA TTTGGCTTTT
GAAAGTGTGG ATAAAAAATA CCAAGCGGGA CTTGTTTCTT ATGTGGAATA TCTTCAAGCT
TTAGAGGCTA AATTTAAAGC ACAAAGTGAT TTAGAGCTTG CTAAAAATGA ATTTGAAATT
ACTAAAGCAA ATTATTATTT TAATGCGGGT ATAGATCTTA ATTCAAAGGT TAAAGAATGA
 
Protein sequence
MRFINIILFL PLVLFGSNLK ELINLSQKNE QYLIKQIQIE QAKLTSKEAF RNYLPSLSLN 
SAYVANNKDR FIIDPQESLF AKVSLHFLLF DGGAREANLR ALESREKLSL LDKEQNKNYL
ALNAITLYFN TLSLEKILLA NQQKIAFLKS TFERLQKFYD AGLSPKDELE SIKAKYHLSL
LELSQNELKL ANIQKEIKIL SNTDFKVQGN AFLENPQQEK SQNYEVMIAK EQISLAKESV
NLAKAEYFPK FYIQDNFNFY KNNYNPKVPA PFVNLADQFL EKYSQGNQFI LGMEWKIFDF
NARAKEVEKE RLNVQIANAN ARLSERKNKE ELNYLDKSLK VLQEQILALN LSLNAANLAF
ESVDKKYQAG LVSYVEYLQA LEAKFKAQSD LELAKNEFEI TKANYYFNAG IDLNSKVKE