| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | JJD26997_0485 |
|---|
| Symbol | |
|---|
| ID | 5390456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. doylei 269.97 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009707 |
|---|
| Strand | - |
|---|
| Start bp | 433935 |
|---|
| End bp | 435134 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640861574 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001397669 |
|---|
| Protein GI | 153952429 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.425547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT ACAAAAAAGC TCTTTTTGCA CTAACTCTTA GTGCTTTTTG TATGGGCGTA
ACCGAATTTG TTATGGCAGG AGTTTTGGTT GATGTTGAAG CGTATTTTAG CGTAGATGCA
AAAACCGCAG GATATCTTAC AACCTTATAT GCTATAGGTG TTGTCATAGG CGCTCCTCTT
ATTACCATAC CTTTAAGTCG TTTTCATAGA CATACACAAC TTTTAATCAA TCTTGGAATT
TTTGCTCTAG CAAATTTCAT TATCTTTTTT AGTGAAAATT TCTATCTTAC AGCATTTGCG
CGTTTTATAG CAGGAACACA ACATGGGGTA TTTTTTGTCA TTGCTACCTT AGCTGTAAGT
GCTATAACTC CAGATGATAA AAAATCAAGC GCTCTAGCTA TAATGGTCAC AGGACTTACT
GTAGCTTTAG TTACTGGAGT GCCGCTTGGA ACTTTCATAG GGCATTATTT TGGCTTTAAA
TTTATCTTTT TACTCATTTT TATCATTACA AGCTTAGCAT TTTTTGGAGT ATGGCATATG
ATGCCCAAAA ATTTACATCC TAGCCCAACC AGTCTTAAAA ATCTAATCCC TGCTTTTTCA
CATCAAAATT TGTTAAAAAC TTATACTATA ACCATTTGTA GTTGTGGGGC TCAATTCGTT
CTTTATACTT ATTTGCAAAA ACTACTTGTA GAAATAAGCG GTTTTAGAGT CCAAGATACA
GCTTATATCT TGCTTTTATA TGGAATTTGC GCAATTTGCG GGAATTTATG GGGCGGAAAA
ATAGTAGATA AAAAAGGTGC TATTTTTTCT TTGCGTCTTA TTTTAAGCAT ACAAGTTCTA
GTATTTTTAA GCGTATTTCT CGCCATGTAT TCTAAAATTT TAATCATTTT TAGCGTAGCC
TTGATAGGCT TTTTTGCCTT TTCAACCATA CCTGCACTAA AAATGCTTAG CATTGCTAAA
GCTAAACGCC ATACTTATAA AGTCATAGAT AGTACAGTAA GCGTGAATGA AGCAGCTTTT
AATGTAGGCA TAGCCTTAGC AAGTTTTTTA GGTGGGGTTG TTTTAGCAGG ATTGGGTATA
GAATTTAATG CTTTATTTTC AGCACTTTTC GTAAGTCCTG CTTTGATTTT TGCCTTGCTT
TTTGCTAAAG ATAAATTAAA TTATAAAAAA TTTCAAAGAA AAAGTTTTAA AAAGGTATAA
|
|---|
| Protein sequence | MQNYKKALFA LTLSAFCMGV TEFVMAGVLV DVEAYFSVDA KTAGYLTTLY AIGVVIGAPL
ITIPLSRFHR HTQLLINLGI FALANFIIFF SENFYLTAFA RFIAGTQHGV FFVIATLAVS
AITPDDKKSS ALAIMVTGLT VALVTGVPLG TFIGHYFGFK FIFLLIFIIT SLAFFGVWHM
MPKNLHPSPT SLKNLIPAFS HQNLLKTYTI TICSCGAQFV LYTYLQKLLV EISGFRVQDT
AYILLLYGIC AICGNLWGGK IVDKKGAIFS LRLILSIQVL VFLSVFLAMY SKILIIFSVA
LIGFFAFSTI PALKMLSIAK AKRHTYKVID STVSVNEAAF NVGIALASFL GGVVLAGLGI
EFNALFSALF VSPALIFALL FAKDKLNYKK FQRKSFKKV
|
|---|
| |