| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0122 |
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| Symbol | |
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| ID | 5384252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 136944 |
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| End bp | 139748 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640857231 |
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| Product | putative type IV secretion system protein IcmO/DotL |
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| Protein accession | YP_001393420 |
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| Protein GI | 153930764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATT TTAAAGGTGC TTCCAGAAAG TTTGAAGTCA AGACGTCACG CAGACGTAAA
GACTTACGAC CGATGGGGCA AAAATTAAAA GATTACTTTC TTTCTGGTGA AGGCGTCATA
ACCGGTATAA TAGCCATACC AGTAATATCA CTCGTGCTTA TTCGTGTGCC GTTCTCAGCA
GAATTAATAC TACTGGGGAT TGGGATATAT CGACGGAAAT ATCTTGATTT TAAAAAAATA
GCTTTTGACT TTCCTTATAG AGTCCCTGTT CAAGCCAAAG TATTAGATGG TTCAACAACG
GGGGGGAAAA GTCTGGGGAA GGGAGTTACT CTTGTCGGCA CGGATATTGA GTATAAAGAA
CAGATCTATG CGGGAGACAG TGACCTCCGT ACTCATGCTC TTGTATTAGG GACTACAGGT
TCAGGTAAAA CAGAATTCTT GCTGGGCCTC GTATTTAATG CCTTAGTCCA AAATACAGGC
TTTATTTATG TCGATGGTAA AGGTGATCCA AAGTTACAGA AAGACGTCTT TAGGCTAGCC
CGATATTTAG GCAGAGAAGA AGACCTGCTA ATAGTCAACT TCATCACTTC TGGCCGAGAC
TTTGTTGAGA AACAAGCTGA TAAAGTCACA AATAACATGA ACATTATGGG AAACACCTCA
TCTGGCATGT TAATTGAACT CATTGTCGCG TTAATGGATG ACAGTGGCGG CGGCGGGGAC
ATGTGGAAAG GCCGCGCTAT TTCATTCGTC GCCGCGCTAA CACGGCCTCT AACCTATTTA
AGGGACAAAG GATTTATCGG CCTGTCACCA GAGGATTATT TAAGTTACTT CGAACTACAT
ATTATTGAAG AATTAGTTTT TGAGCATGGC GGCAAGTATG GAGATAACTT TGACGTCATT
GTTGCGCCAT TGAAATCCTA TTTGAAAACA TTGCCGGGTT ATCAGGATAA AAACAGAAAA
AAACAAGAAA CAAAAACACT AGAGCAGCAC GGTTTTATCA TCATGCAGCT CACCCGTATT
TTCAACGACC TAACCTTCAA CTATGGCCAC ATCTTTAAAA CAAAGGTAGG GGACGTCGAT
TTCTTTGACG TGGTAGTAAA CCGCCGATTG CTTACCGTAC TTCTGCCTGC GTTAGAACGT
GCACCAGACA GCATGAGAAT GCTCGGCAAA ATGATTGTTG GATCGATAAA ACAAATGATG
GCGGGGTGCC TTGGTAACAA AGTTGAGGGC GTCGTTCGTG AAATCATTGA TAGCCGTCCT
ACAAACGCAG ATTTTCCGTT TTACACCATA CTAGACGAAT ATGGCTACTA TGCTGTGATT
GGCTTTGCTG TAGCCCCTGC ACAGGCCCGT AGTTTAGGCT TTTCGGTAAT CTTTGCGGCT
CAAGACTTCT CTAGCCTGAA AAAAAGCTCC GCTGAAGAAG CAGATGCTAC ATGGGAAAAC
ACCAACATCC GTGCTATCGG ACGTATCACC TCTGGTGAAA AATCAGAAAC ATGGGAACGC
ATCATCGGCG CAGCAAGTGA TTCTACTGAG GCTGAACTCT CTGGCTTTGA ACGCATTACT
GGGGCAGTAA ACGATCGCTT TTCCCAACAA AATAATATCA GTCTAACGAC TAAACGCCGT
CTGCATTACG ATGATCTCGC CCGTCAGGAG AACGGAGAGT TTACATTCTT AATTGGCAAG
AAAGAGAATT CAGGTCAGGA TGGTGGTGTC CGTGTTATCA GAGGTATGGG GTTCTATACT
GCGGGTAAGA CAATGAAAGA AATGAGAATA AATGATTTCA TCCCCGTGGA ATCACCAGAA
CCTCGTGATC TGCCTGAAAC TAAACTTCAA CTTCAATCTC TTGTCGATAT GATCGCGTCA
GGTAAATTAC CGACCAACTT AAAAAAAGCG GCTGACGCAA GTCCGGTGCT CAAGCAATTC
TCTGACATTT ACGATTTAAA TACCTATCTA AAAGGCCACA ATCACTCAGC TTCACTCACC
GAACGAGACA TCACCAATGC CACGATAGGC TATTACCTAT CAGGGAAAAT TGAAGATTCG
CCATTTAAGT TCACAGCACC AATAGTCACT ATTGCCGAGA ATTTCACAGA AAATGCAGCT
AACGACAAGA CATTAGAACC CATTGAAAAT AGTGAAGAAA TAGCATCTGA ACTTGAATAT
GAATCTGAAT ACCTCAGCGA AGAAGACTTT GACTTAACGG TTGTATCTCA ACGGGAAGAC
CCAGAAACCA AAATGGATGT TTTGGATAGC CAAAAGGGTG ATTTTGATAG ATTATCAGGT
TCACGATTAA CGGAGGCATT ACTGGCTATT GCCATGAATA ATGAAGCAGT AGCTACCAAT
ATTACACAAA CCACATACGA TAATAAACAG GACAATGACG AAGAACATAC TCTACATCAC
ATTAACAGCG AACAAGATTT TTTAAGTGAA ATTAGCCAAC GTGACGTCGA TGGTTTTGAA
AAAAACATAA AAGTCTTTTT CGACTTCTCT GATGATGAAG AGACTGAACA TGAAATTGAT
TTATCAGACA GATTAATAAA TAAACAAGAG AATAACCGTC AATTAATGAC GGCCATGTAC
CACGCACAGT TGATGCTATT ATTCAGTCGA GGCGAAAAAC CCAGCGCTCA GAAGATAAGG
GATATTAAAG ATGATGTTGA AAATGAGTAT CAGAAACTAT TGAATAGCAC CTCCTACCTA
AACGGACAAG AACCTCAAAA AGTCGATGCT GCAACAATGA GACAATCGAT ATCATTGCTG
GGTGCAGAGT GTGGTAAGTT CGTCAAGATG AACTTAACAA AATAA
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| Protein sequence | MANFKGASRK FEVKTSRRRK DLRPMGQKLK DYFLSGEGVI TGIIAIPVIS LVLIRVPFSA
ELILLGIGIY RRKYLDFKKI AFDFPYRVPV QAKVLDGSTT GGKSLGKGVT LVGTDIEYKE
QIYAGDSDLR THALVLGTTG SGKTEFLLGL VFNALVQNTG FIYVDGKGDP KLQKDVFRLA
RYLGREEDLL IVNFITSGRD FVEKQADKVT NNMNIMGNTS SGMLIELIVA LMDDSGGGGD
MWKGRAISFV AALTRPLTYL RDKGFIGLSP EDYLSYFELH IIEELVFEHG GKYGDNFDVI
VAPLKSYLKT LPGYQDKNRK KQETKTLEQH GFIIMQLTRI FNDLTFNYGH IFKTKVGDVD
FFDVVVNRRL LTVLLPALER APDSMRMLGK MIVGSIKQMM AGCLGNKVEG VVREIIDSRP
TNADFPFYTI LDEYGYYAVI GFAVAPAQAR SLGFSVIFAA QDFSSLKKSS AEEADATWEN
TNIRAIGRIT SGEKSETWER IIGAASDSTE AELSGFERIT GAVNDRFSQQ NNISLTTKRR
LHYDDLARQE NGEFTFLIGK KENSGQDGGV RVIRGMGFYT AGKTMKEMRI NDFIPVESPE
PRDLPETKLQ LQSLVDMIAS GKLPTNLKKA ADASPVLKQF SDIYDLNTYL KGHNHSASLT
ERDITNATIG YYLSGKIEDS PFKFTAPIVT IAENFTENAA NDKTLEPIEN SEEIASELEY
ESEYLSEEDF DLTVVSQRED PETKMDVLDS QKGDFDRLSG SRLTEALLAI AMNNEAVATN
ITQTTYDNKQ DNDEEHTLHH INSEQDFLSE ISQRDVDGFE KNIKVFFDFS DDEETEHEID
LSDRLINKQE NNRQLMTAMY HAQLMLLFSR GEKPSAQKIR DIKDDVENEY QKLLNSTSYL
NGQEPQKVDA ATMRQSISLL GAECGKFVKM NLTK
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