| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_B0018 |
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| Symbol | |
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| ID | 5384189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009705 |
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| Strand | + |
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| Start bp | 24350 |
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| End bp | 25429 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640857127 |
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| Product | type II secretion system protein F |
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| Protein accession | YP_001393316 |
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| Protein GI | 153930642 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACTTC ATTACTTAAT CAATGATGTT GGGACATGGT GGCACAAAGC AAATTTTAGC
GGGGCTGAAC GAATTGAATT GTATCGAAGC CTGAGTATAT TAATGCGGAA TAAAATCAAA
CTCGATGACG CATTGCGTAA ACTATATCAA GTATACAGTA AAAATGGGAA GAAAAGAGGT
AGCAGACAAG CTATTATTGT TTGGGACTGC TTACAAAGTA TATCTAATGG CAAGTCTCTC
TCAACAGCAC TGACACGTTG GGTTCCTAAT CATGAATCAA CACTCATTAA ATCAGGTGAA
GAGAGTGGTT CAATTACTAA AGCATTTGCT GAAGCAGTTA AAATGATTCA GGTTAAAGGT
AAACTTCTGG GATCTATAGC AAAGGCCACT TTATATCCGT TAATGTTATC TTTTAGCTTG
GCAGCATTGC TTAACATTAC AGCCAATGAT GTTATGCCAA AGATAAGTCG AGTTTCCAAT
CCTGATCTTT GGGAGGGTTC TGCCAGATGG CTATATTTAT TATCTGAGTA TACTGTTGAC
TATGGTTTAT ATGTTGTCAT TTTTTTGGTA TCTTTAACCA CGGCTTCTAT TGTTAGCCTA
CCTTATCTCA AGGGAAATAT TAGAATTAAA CTAGATCGCA TACCTCCTTA TTCATTATAT
AGGATGCTTC ATGGATCTGC TTTTTTGCTT AATATATCGG TAATGATGTC AGCAGGAATA
CAAATGCAAG AGGCATTAAG GATCATTAGT AACGGTTCTT CTCCTTGGCT TATGCAACGT
GTTAATTCTG CTCTGTTTGG TATTGGCCTT GGCAAGAACT TAGGGGAAGC GTTGGAAATT
TCCGGCTATG ACTTTCCTGA TAGGAAGGCA ATTCCATTTA TCTCGATTTT AGCAGATACG
GGTAATTTAG ATGAAGTTTT GCCTGATTAT GCAAATGAGT GGCTAGAAGA GTCGGTCAGA
AATATAGACA CAATTGCAAA TTGGATGCTG TCTATTGGAC TTATTTTAAT TGGGCTTGTC
ATTGCACTTA TCATGATAGG AACTAATGAA ATATCTAATT ATATGCAAAC AATGAATTAG
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| Protein sequence | MILHYLINDV GTWWHKANFS GAERIELYRS LSILMRNKIK LDDALRKLYQ VYSKNGKKRG
SRQAIIVWDC LQSISNGKSL STALTRWVPN HESTLIKSGE ESGSITKAFA EAVKMIQVKG
KLLGSIAKAT LYPLMLSFSL AALLNITAND VMPKISRVSN PDLWEGSARW LYLLSEYTVD
YGLYVVIFLV SLTTASIVSL PYLKGNIRIK LDRIPPYSLY RMLHGSAFLL NISVMMSAGI
QMQEALRIIS NGSSPWLMQR VNSALFGIGL GKNLGEALEI SGYDFPDRKA IPFISILADT
GNLDEVLPDY ANEWLEESVR NIDTIANWML SIGLILIGLV IALIMIGTNE ISNYMQTMN
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