| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_A0064 |
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| Symbol | |
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| ID | 5384120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009704 |
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| Strand | + |
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| Start bp | 23436 |
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| End bp | 24500 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640857070 |
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| Product | putative type IV secretion system protein PilR |
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| Protein accession | YP_001393259 |
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| Protein GI | 153930581 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 82 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT TTAATCGTGC TCTTTATAAA ATGACGTTCA ATGTTAATGA CCGAGAGGAT
GTTTATGACA ATTTCAGACA ATATCTTATA GATGGTCAGT CTGTTGATAA TACATTCAAG
AATTTGATTG TTAATTATAC CCGGCGAGGG AGAAAACCCA ATAGCCCGAT GGCTGAGATT
ATAAGGGAAT GGGAAGAGAA ATTTAAGTTG GGCGATACAT TAGGTGAGTC TTTGAGAGAA
TGGATACCCG AACAGGAGCT AAGTGTCATA GATGCTTGTG ATACTGCTGG ACGGCCTTGG
GATGGTTTTC AAAAAGCAAT CAAGATAGCA AGATCTGCGG AAAGAATTAA AAAAACTATC
AAGGGTGCCT TTTTTACCAG CATCTACATG TTTTTACTTT CTTTTATTTT ACTGGCTTTT
GCTTGCTCAC TCCTTGTCCC TACATTGCTC GAAGCCGTGC CTTTATTTAG ATGGAGTACC
ACACAGAAAT TTGTTTATTA TTTTTATATA TTTATCAGTG GTTATTGGTG GGCATTAATT
GCCGTTTGTT TGATAGTTGG ATATATTATT TATCATTCAT TAGACAGATG GACAGGCAAC
TCACGATTTC ATGCTGATAA GTTTGTTCCG TATTCTCTAT ATAAAGAAAT GCATGGCGCA
ACATTTATTA TCAATGTAGA CGCGATGTTG TCAGCGGGAA TACCACTAAA AGATTCACTG
ATTAAAATAC GGAACATGTC TGATTCTGAT TGGTTGATAG AAAGGGTGAA TGGTGCAATA
TCAGGTTTAA CTGAGGGGGA AGAAAATTTA GGGCTAGCAT TAGATATTTC TAACTTTGAA
TTTCCAAGTG AAGACGCAAT TATTAAAATG CAGAGCCTTT TTGAAACCGC GAATAAAGAA
GGTTCATTAG AGCGTTTTGG TGAACGTCAA CTTGAAAATA CAATATCGAG AGTCGAAAGA
AAAACAGCAG TCATTAAAGT TGCAAGTATG GTTTTTGGTG CCGGTTGCAC CGTAGGAATC
TTCTTTGTCA TGTACAGTTT AATTCAACAA GTCTTTGGCA TTTAA
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| Protein sequence | MNKFNRALYK MTFNVNDRED VYDNFRQYLI DGQSVDNTFK NLIVNYTRRG RKPNSPMAEI
IREWEEKFKL GDTLGESLRE WIPEQELSVI DACDTAGRPW DGFQKAIKIA RSAERIKKTI
KGAFFTSIYM FLLSFILLAF ACSLLVPTLL EAVPLFRWST TQKFVYYFYI FISGYWWALI
AVCLIVGYII YHSLDRWTGN SRFHADKFVP YSLYKEMHGA TFIINVDAML SAGIPLKDSL
IKIRNMSDSD WLIERVNGAI SGLTEGEENL GLALDISNFE FPSEDAIIKM QSLFETANKE
GSLERFGERQ LENTISRVER KTAVIKVASM VFGAGCTVGI FFVMYSLIQQ VFGI
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