Gene YpsIP31758_A0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_A0030 
Symbol 
ID5384119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009704 
Strand+ 
Start bp51135 
End bp51863 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content39% 
IMG OID640857102 
Productconjugal transfer protein TraL 
Protein accessionYP_001393291 
Protein GI153930593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value4.98281e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAATA TTCATATGGT TTTACAAGGT AAGGGTGGTG TTGGTAAATC TTTCATCTCA 
TCCCTGATTG CTCAATATAT GGCAAGTAGT GGCCAGCTTC CTTTATGCGT CGATACAGAT 
CCCGTTAACG CTTCATTTTT AGGATACAAG GCGTTGAAAG TACGGAGGCT TGAAATCATG 
GAAGGAGATG AAGTAAACAC GCGAAACTTC GATGAGTTAG TGGAATGGAT AGCAGAAACA 
AAAGTGGATA TGGTTATCGA TAATGGGGCC AGCTCATTTA TTCCATTATC ATCATATTTA 
GTTAGTAATG CTGTTCCTGG CTTATTGCAA GAAATGAGTC ACCAATTAAT TATCCATTCA 
GTGGTAACAG GAGGGCAAGC CTTGCCAGAA ACTTTGGCAG GTCTTGAGTC ACTTGTTAAA 
TGGTTCCCTG ATGAAACTAT ATTTATAGTG TGGCTAAATC CATATTGGGG GCCAATTATC 
GATAACGGTA AAACCTTTGA GGAAATGCCT GTCTACGAAA AATATAAAGA ACGCATTTCC 
GCGATTATTC ATCTTCCAGA GTTGAAAGAG GAAACATACG GGAAAGACTT AACGGATATG 
CTTCAAGCTA GACTTACGTT TGATCAAGCA TTGAAAATGA AAGATTTATC TATCATGACT 
CGCCAACGAC TTAAAATGAT TCAGAAGTTA GTTTACAACC AGCTTGATTT GTTGGCGAAA 
GCCTCATGA
 
Protein sequence
MANIHMVLQG KGGVGKSFIS SLIAQYMASS GQLPLCVDTD PVNASFLGYK ALKVRRLEIM 
EGDEVNTRNF DELVEWIAET KVDMVIDNGA SSFIPLSSYL VSNAVPGLLQ EMSHQLIIHS 
VVTGGQALPE TLAGLESLVK WFPDETIFIV WLNPYWGPII DNGKTFEEMP VYEKYKERIS 
AIIHLPELKE ETYGKDLTDM LQARLTFDQA LKMKDLSIMT RQRLKMIQKL VYNQLDLLAK 
AS