Gene Anae109_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3963 
Symbol 
ID5375956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4623371 
End bp4624165 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content73% 
IMG OID640845487 
ProductTPR repeat-containing protein 
Protein accessionYP_001381125 
Protein GI153006800 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.187703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGG CACGCTCGGT CGCCGTGGTC TCCGCGGTCC TCGTCCTGTC CGCGTGCGCG 
ACTGCCCGGC GTGCCGGCCC CCAGGGGATC TCAGGCGTCC GCCTGGCGGT CGCGCGCGAT
CTCGTGGATC GTCGCCAGTA CGGCGATGCG CTCGCAGCCA TCCAGGCGAT CCACGAGACC
GATGGCCGAT CGGCCCAGAC GCTGACGCTG CGGTCTTTCG CGTACCGGGG GCAGGGTCTC
ACCGCCGACG CCGAGGAGGA CCTGCGCGAG GCGCTGCGCC TCGACCGGGA CCACGCGCCT
GCGCACGCGG CGATCGCGGT CCTTCACGAC GAGGCGAAGC GCTGGGCCGA CGGCGAGGAG
CACCACCGCC GGGCGACGGC GCTCGACCCG ACGAATGCTT CCTACCTGAG CGACTGGGGG
TGGGCGCTCC ATCTCCAGGG CCGCACGCAG GACGCGCTCG CGCGCCTGCA GGCGGCGATC
CGGCTCGATC CGCTGCCGCC GCGCTACCAC AACAACCTCG GGTTCGCGTA TGCGCGCGCG
GGGGATTTCA CGCGAGCGGC GCAGCGGTTC GCGGTCGGCG GCGCACCCGC CGAGGCGAAG
AACAACCTGG GCTACGCGTA CGAGCTCGCC GGCAACCTGC CGCAGGCGTT CGAGGCGTAC
TCGGAGGCGG TGCGGCTCGC CCCCGGGTTC TCCCGCGCGC GCGCAAACCT GGAAGAGGTC
GCCCGTAAGC TCAACCGCTC GCCGCCGCCG GAGGGGGCGC GTCCGGAGAA GGTTCCCTCG
GGGAGGATGC AATGA
 
Protein sequence
MNPARSVAVV SAVLVLSACA TARRAGPQGI SGVRLAVARD LVDRRQYGDA LAAIQAIHET 
DGRSAQTLTL RSFAYRGQGL TADAEEDLRE ALRLDRDHAP AHAAIAVLHD EAKRWADGEE
HHRRATALDP TNASYLSDWG WALHLQGRTQ DALARLQAAI RLDPLPPRYH NNLGFAYARA
GDFTRAAQRF AVGGAPAEAK NNLGYAYELA GNLPQAFEAY SEAVRLAPGF SRARANLEEV
ARKLNRSPPP EGARPEKVPS GRMQ