Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3963 |
Symbol | |
ID | 5375956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 4623371 |
End bp | 4624165 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640845487 |
Product | TPR repeat-containing protein |
Protein accession | YP_001381125 |
Protein GI | 153006800 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.187703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGG CACGCTCGGT CGCCGTGGTC TCCGCGGTCC TCGTCCTGTC CGCGTGCGCG ACTGCCCGGC GTGCCGGCCC CCAGGGGATC TCAGGCGTCC GCCTGGCGGT CGCGCGCGAT CTCGTGGATC GTCGCCAGTA CGGCGATGCG CTCGCAGCCA TCCAGGCGAT CCACGAGACC GATGGCCGAT CGGCCCAGAC GCTGACGCTG CGGTCTTTCG CGTACCGGGG GCAGGGTCTC ACCGCCGACG CCGAGGAGGA CCTGCGCGAG GCGCTGCGCC TCGACCGGGA CCACGCGCCT GCGCACGCGG CGATCGCGGT CCTTCACGAC GAGGCGAAGC GCTGGGCCGA CGGCGAGGAG CACCACCGCC GGGCGACGGC GCTCGACCCG ACGAATGCTT CCTACCTGAG CGACTGGGGG TGGGCGCTCC ATCTCCAGGG CCGCACGCAG GACGCGCTCG CGCGCCTGCA GGCGGCGATC CGGCTCGATC CGCTGCCGCC GCGCTACCAC AACAACCTCG GGTTCGCGTA TGCGCGCGCG GGGGATTTCA CGCGAGCGGC GCAGCGGTTC GCGGTCGGCG GCGCACCCGC CGAGGCGAAG AACAACCTGG GCTACGCGTA CGAGCTCGCC GGCAACCTGC CGCAGGCGTT CGAGGCGTAC TCGGAGGCGG TGCGGCTCGC CCCCGGGTTC TCCCGCGCGC GCGCAAACCT GGAAGAGGTC GCCCGTAAGC TCAACCGCTC GCCGCCGCCG GAGGGGGCGC GTCCGGAGAA GGTTCCCTCG GGGAGGATGC AATGA
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Protein sequence | MNPARSVAVV SAVLVLSACA TARRAGPQGI SGVRLAVARD LVDRRQYGDA LAAIQAIHET DGRSAQTLTL RSFAYRGQGL TADAEEDLRE ALRLDRDHAP AHAAIAVLHD EAKRWADGEE HHRRATALDP TNASYLSDWG WALHLQGRTQ DALARLQAAI RLDPLPPRYH NNLGFAYARA GDFTRAAQRF AVGGAPAEAK NNLGYAYELA GNLPQAFEAY SEAVRLAPGF SRARANLEEV ARKLNRSPPP EGARPEKVPS GRMQ
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