Gene Anae109_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3640 
Symbol 
ID5375096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4253446 
End bp4254342 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content73% 
IMG OID640845161 
ProductLysR family transcriptional regulator 
Protein accessionYP_001380804 
Protein GI153006479 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.101202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA ACCTCCTCAC CCTCTTCGAG GCCGTGGCGC GCACCTCCAG CTTCTCCGCC 
GCCGCGAAGG AGCTCGGCAT CCCGAAGTCG TCGGCGAGCC GCGGCGTCGC GCGGCTGGAG
GGCGAGCTCG GCGCCCAGCT CCTCTTCCGC ACCACGCGCC AGGTCTCCCT GACGGCGACG
GGCACGGCGC TCTACGACCG CGTCACGCCG CTGCTCCGCT CGGTGAAGGC CGCCCTCGGC
GAGCTGCCGG AGCGCGAGGA GGCGCCGTCG GGGACGCTCA AGCTCACCGC GCCGGTCGAC
CTCGGCGTCC TGTTCCTGGC GGAGGTGCTG ACGCGCTACA CGGCGCGGTA TCCGGCGGTG
TCCGTGGACC TGCACCTCAC CGGCCGGGTG GTGGACCTCG TGGCCGAGGG CTTCGACGTC
GCGCTCCGCG CCGCCTCGAA GCTCGAGGAC TCGTCGCTCA TCGTGCGCCG GGCGGCCGCC
GTCGTGTTCC AGCTCTACGC CTCGCCTCTC TACCTCTCCC GCCGTGGCAC GCCGCGCACC
GAGGACGAGC TCGACGCGCA CGACTGGATC GTGTTCCGCG GTGGGCCTCA GAAGCTGCGG
ATCACCGGCC CCCGGCCCGT CCCGGCGCAC CCGCCGCGCA TCGTCTGCGA CGACCTCCTC
TTCGTCCGCG ACGCCGTCCG GTCGGGCGCC GGGATCGGGC TGCTCCCGAC CTTCGTGGCA
GAGCCCGACG TCCTGGCGGG CACGCTCGTG CGGATCGTGC CCCGCTTCGA GCGGTCGGCC
GGGAGCATGT ACATCGTCAC GCCCTCCGCG AAGCACGTCC CGCGCAAGGT GACCGCGTTC
CGGGATCTCG TCCTGGAGAT GCTGAAGACC CGGACCGGCG CGGGGGCGCC CGTCTGA
 
Protein sequence
MDLNLLTLFE AVARTSSFSA AAKELGIPKS SASRGVARLE GELGAQLLFR TTRQVSLTAT 
GTALYDRVTP LLRSVKAALG ELPEREEAPS GTLKLTAPVD LGVLFLAEVL TRYTARYPAV
SVDLHLTGRV VDLVAEGFDV ALRAASKLED SSLIVRRAAA VVFQLYASPL YLSRRGTPRT
EDELDAHDWI VFRGGPQKLR ITGPRPVPAH PPRIVCDDLL FVRDAVRSGA GIGLLPTFVA
EPDVLAGTLV RIVPRFERSA GSMYIVTPSA KHVPRKVTAF RDLVLEMLKT RTGAGAPV