Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3572 |
Symbol | |
ID | 5376469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4185378 |
End bp | 4187339 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640845094 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001380737 |
Protein GI | 153006412 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.102808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0129675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCTCGA TCTCCCGATC GCCGGGGCGC GTGCGCGCCC TCTCCGTCGC GCTGTCGCTC GCGCTCGCGC CGCTCGCGCG CGCGGCGCCC GCGGCCGCCG TCGCCCCGCA GGAGAGCGAG CCGCCCGTCG TGCTCCCCGA GGTCGAGGTC CGCGTACCGC GCGCGGAGGT CGAGAAGGAT CCGACCGCCT CGGCGACGGT GGTCACCGCC GAGCGCTTCG AGGGCGAGGC GAAGGACGTC GCGCAGCTCC TCGCGACCGC CCCGGGCGTG TCGGTGACCC GCTACGGGAC GCTCGGCCAG CTCGCCACGG TCTCGATCCG CGGGGTCGCC GCGGACGGCG TGAAGGTCCT GCTCGACGGG CTGCCGCTCG GCACCGCGGG AGGCGGCGTC GATCTCGCGA CCATCCCGCG CCAGTGGATC TCCCGCATCG AGGTCGTGCG CGGCGCCGCG GGGGCGCAGT TCGGCGCGGG CGCGCTGGGC GGCGCGGTGA ACGTGGTGAC GCGGGGCGGC CAGGTGGGCG ACGTGTCCGG AGAGGCGACC GCCGGGGCGT TCGGCACCTA CGCGGCCTCC GTCGACACGG TCGCGCCGGT CGGCCCCTTC GCGCTCTTCG CCGCCGCGAG CGGCGAGATC ACCGAGGGCG ACTTCAGCTA CGAGCTCGAC CGCACCCCGG ATCGACCCGG CGGTCCCGTC GAGGAGAAGA CGCGGGTGAA CAACGGGGCG CGCCGCGCCG GGGCCATCGC GAAGCTCGGC GGCTTGGCGG GGGGCTTCCG CGTCGACGGC CTCGCCCAGC TGACCGCGGG GCGGCGCGAG CTGCCCGGCT CCCCCTACCA GCCGACGCCG GGCGACTGGC AGGAGGACGG CCGCGTGCTC GCCATGCTGC GCGTCGCCCG CGAGGTGCGG CCGCGGCTCA CGCTCGCCGG GCGCGTCCAC GGCAGGCGTG ACCTGCTGGA CACAGAGCTC GCGACGCTCG GGACCGAGCC GACGCGACAG CGCGGCGGAG CCATCGGCGT CGAGGTCGAG GGTGGGCTCA CCCACGGTGT AGGCGTGCTG ACCGCCGTCC TGTCGGCGGA GAACGAGGGC TACGAGAGCG AGGCGCTGGG CGGCACGCGC GATCGCGCGG GCTTCGCCGG GGCCCTCGCC GAGGACCTGC TCCTGGCCGG GGGCCGGCTG CGGATCGGCG CCTCGGTGCG CGCCGAGCGG ACCGGTGACT TCGCGGGGGT CTCCGCCAAG CTCGGGGCGG CATTCGAGCT CGCGCGCGGG CTCGCGCTCC GCGCCAGCGG CGGCCGGACC TACCGCGTCC CGAGCTTCGC CGAGCTCCAC CTGGAGCAGG GCCTCCTCTC GCCGAACCCC GACCTGCGCC CCGAGACCGG CGCGGGCGCG GACGCCGCGC TGGTGTACGA CGGCGCGCTC GGGCTCCTGT CGGTCGGCGG CCACGCCGCC GTCTACGAGG ACATCATCAC CTACGAGCCG GCGAGCCTCG GCCACTTCCG CCCGTTCAAC ACGGGCCGCG CGGTCGTCTC CGGCGTGGAG GCCGAGGCCG CGACCACGCC GTGGCGCCGC GCCCTCGGGC TGGCCCTCTC CGGCGCGTAC ACGTTCCTCC CGACGGAGGT GCTGCGCGGC AGCCCCGGGG TGCTGGGGAA CGCGCTTCCG AGGCGGCCGC TGCACCGCCT CTACGCGCGG GCCGCCGTCT CGCCCGGGCG CTTCGGCGCG CACGTCCAGG TGGAGCACGC GCGCGACCAG TACCTCGGCG TGCTGAACCA GGAGACCCCG CTGCCCGACG TCACCCTGGT CGGCGCGGGC GCATCGATCC GGTTCCTGCG CCGACCGGCG CTCGCGCTCC ACGTCGAGGT CGACAACGTC GCAGACGACC GAACGCTCGT CGACGGCTAC GGCAACCCCC TCCCCGGCCG GACGTGGATG GTCACGCTCC GCGCCGCTTC CTCCCAGGAA AGGACCCGAT GA
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Protein sequence | MSSISRSPGR VRALSVALSL ALAPLARAAP AAAVAPQESE PPVVLPEVEV RVPRAEVEKD PTASATVVTA ERFEGEAKDV AQLLATAPGV SVTRYGTLGQ LATVSIRGVA ADGVKVLLDG LPLGTAGGGV DLATIPRQWI SRIEVVRGAA GAQFGAGALG GAVNVVTRGG QVGDVSGEAT AGAFGTYAAS VDTVAPVGPF ALFAAASGEI TEGDFSYELD RTPDRPGGPV EEKTRVNNGA RRAGAIAKLG GLAGGFRVDG LAQLTAGRRE LPGSPYQPTP GDWQEDGRVL AMLRVAREVR PRLTLAGRVH GRRDLLDTEL ATLGTEPTRQ RGGAIGVEVE GGLTHGVGVL TAVLSAENEG YESEALGGTR DRAGFAGALA EDLLLAGGRL RIGASVRAER TGDFAGVSAK LGAAFELARG LALRASGGRT YRVPSFAELH LEQGLLSPNP DLRPETGAGA DAALVYDGAL GLLSVGGHAA VYEDIITYEP ASLGHFRPFN TGRAVVSGVE AEAATTPWRR ALGLALSGAY TFLPTEVLRG SPGVLGNALP RRPLHRLYAR AAVSPGRFGA HVQVEHARDQ YLGVLNQETP LPDVTLVGAG ASIRFLRRPA LALHVEVDNV ADDRTLVDGY GNPLPGRTWM VTLRAASSQE RTR
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