| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3485 |
|---|
| Symbol | |
|---|
| ID | 5374549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 4091846 |
|---|
| End bp | 4093003 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640845009 |
|---|
| Product | homogentisate 12-dioxygenase |
|---|
| Protein accession | YP_001380652 |
|---|
| Protein GI | 153006327 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.306053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACC GGATCGTGCA GGGCGCGGTC CCGCGGAAGC ACCACATCGC CTTCCGCGAT
CCCGACGGGC GCCTCCTGCA CGAGGAGGCC TTCACGCGCG CCGGGTTCGA CGGTGCGTAC
ACCCTCGCCT ACCACCGGCA CCGGCCCCAC GCGACGCACG CCGCCGAGGT CCGTCACGGC
TGGACGCTGC CGCGGGCGGC GCCGCCGCGC GGTCTCCTGA AGCGCCACTA CCGCACGCAG
GAGCTCCCCC TGCCCGCGGG GCCGGCGGTG GACGCGCGCG TCCCGCTCCT CTTCAACGCG
GACGTGGTCG TCGGCCTCGC CACGCCGAGC GCGGAGGATC CGGTCTACCT CTCGAACGGC
GACGGCGACG ACCTCTTCTT CGTCCTCGAG GGAGGCGGGC TCTTGCGCAC GCCGCTCGGC
GACCTGCGCT TCGCGCAGGA CGACTACGTC TACGTGCCGA AGGGGCTCCT CCACCGCTTC
GTGCCGGGCG CGGGTCCGCA GCGCTGGCTC TCCCTCGAGT TCCCGGGCGG CCTCCACCTG
CCCTCCCAGT GGCGCAACGA GACCGGCCAG CTCCGCATGG ACGCGCCCTA CTCCCACCGC
GACTTCCGCC GCGTCGAGTG GACGGGCCCG CTCGACGAGG GGATCCGCGA GCTCCTCGTC
AAGCGCGCCG GGGCTTTCCA CGCCTTCCGC TACGACGAGT CGCCGCTCGA CGTGGTGGGC
TGGGACGGCG CCGTGTACCC GTTCGCCTTT CCCATCCTGA ACTTCCAGCC GCGCGCCGGG
CTCGTGCACC TGCCGCCCAC CTGGCACGGC ACCTTCGCCG CCCGCGGCGC GCTGGTGTGC
TCGTTCGTCC CGCGCGTGGT GGACTTCCAC CCCGAGGCGA TCCCCTGCCC CTACCCGCAC
GCCTCGCCGG ACGTGGACGA GATCCTGTTC TACGTCCGCG GGGAGTTCAC CTCCCGGCGC
GGCGTGGGCC CCGGCTCGAT CTCGCACCAC CCCGCGGGCG TGATGCACGG GCCGCACCCG
GGCGCCTACG AGGGCTCGAT CGGCGCCCGC ACCACGAGCG AGCTCGCGGT CATGCTCGAC
TGCTACCTCC CGCTCGCCGC GACCCCCGCC GCGCTGGGGA TCGAGGACCC CGGCTACCAG
GAGAGCTTCG TGCGCTGA
|
|---|
| Protein sequence | MLDRIVQGAV PRKHHIAFRD PDGRLLHEEA FTRAGFDGAY TLAYHRHRPH ATHAAEVRHG
WTLPRAAPPR GLLKRHYRTQ ELPLPAGPAV DARVPLLFNA DVVVGLATPS AEDPVYLSNG
DGDDLFFVLE GGGLLRTPLG DLRFAQDDYV YVPKGLLHRF VPGAGPQRWL SLEFPGGLHL
PSQWRNETGQ LRMDAPYSHR DFRRVEWTGP LDEGIRELLV KRAGAFHAFR YDESPLDVVG
WDGAVYPFAF PILNFQPRAG LVHLPPTWHG TFAARGALVC SFVPRVVDFH PEAIPCPYPH
ASPDVDEILF YVRGEFTSRR GVGPGSISHH PAGVMHGPHP GAYEGSIGAR TTSELAVMLD
CYLPLAATPA ALGIEDPGYQ ESFVR
|
|---|
| |