Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2949 |
Symbol | |
ID | 5377209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 3421400 |
End bp | 3422119 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640844476 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001380132 |
Protein GI | 153005807 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.226864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAG CGAACCCCGC GGCGCCGCCG GTGCGCATCG TCCTGCTCCG GCCGCGAAAC CCCGAGAACC TCGGAGCGGT GGCGCGCGCC ATGAAGAACT TCGGCCTGGC GGACTGGGCC ATCGCCGAGC TCGGGACGCA CGACTTCGCG ACCGCGAGGC GCGTCGCCGT GCACGCCGAG GATCTGCTCG ACCGCCCCCG GCTCGTCCGG ACGCTCGACG AGGCCGTGGC CGACTGCGCC TGGGTGGTGG GGACGAGCTC CCGGCGCGTG CGCGGCAAGC GGCGGCTCTC CCCGGCGGAG GTCGCGCGCG AGGCGATGGA GCGCGCGCCG GCGGGCCGCA CCGCGCTCGT CTTCGGCGAC GAGCGCAGCG GGCTCGCGAA CGACGAGGTG CTCCGCTGCC ACGATCTCTC CGCCATCCCC ACCGACGAGG CGCAGCCGTC CGTGAACCTC GCGCAGGCCG TGCTCCTGTA CGCCTACGAG CTCCGCCGCG CCGCGCTCGC GACGCGCGAG CCAGCCCCGG CGGCAGCGGG CGCGACCGAC GGCGAGCTGC GCGGGCTGGA GGAGATGCTG CGGGCGGCGC TGCGCGAGAC CGGGTTCCTG GCCGGCCCGG AGCGCCACGC CGTCCGCGAC CTCCTCTCGC CGCTCCGCCG CGCGCGGCTG ACGAGGAGCG AGGTGCGGCT GTGGACGGCG GCGCTGCGGA CGATGGGGAG GGGGAGGTAG
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Protein sequence | MSRANPAAPP VRIVLLRPRN PENLGAVARA MKNFGLADWA IAELGTHDFA TARRVAVHAE DLLDRPRLVR TLDEAVADCA WVVGTSSRRV RGKRRLSPAE VAREAMERAP AGRTALVFGD ERSGLANDEV LRCHDLSAIP TDEAQPSVNL AQAVLLYAYE LRRAALATRE PAPAAAGATD GELRGLEEML RAALRETGFL AGPERHAVRD LLSPLRRARL TRSEVRLWTA ALRTMGRGR
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