Gene Anae109_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2468 
Symbol 
ID5377487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2861553 
End bp2862257 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content78% 
IMG OID640843987 
Productlytic transglycosylase catalytic 
Protein accessionYP_001379653 
Protein GI153005328 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC CGCGCCTCCA CGGGCTCGCC GGAGCCGCCG TCGCCGTCGC CTTCGTGGCG 
TCGGCGGTCG CGTTCCCGGG CGAGCTCTCG GAGGAGGCGC GCCAGCTGGC GCCGGCCGAG
CTCGGACCGG CGGCGAGCCT GGTGGACGCC GCCGGCGGCG CGCTGCCCGC CGTCGCCCGC
ATCGAGAGGC AGCTCGGGCG CCGGATGCCG GCGCTCGCGG AAGCCCGCCG GCAGGCGCTC
GCGCGCACCA TCGTCGCGGA GGCCCAGGCC GCGCGCATCG ACCCGCTCCT CGTCCTCGCG
CTCATCCAGG TCGAGTCCTC CTTCGACCCG CAGGCGATCT CCGGCGCCGG GGCGCGCGGC
CTCATGCAGC TCCGCGAGCC CACCCTGAGG CGCGAGCTCG AGCGCGCCGG CCTCCTGCAC
CTCGATCTCC ACGATCCCGC CGCCAACGTG GTGGCGGGCG TCCGCTACCT CCGGCGCCTG
CTCGACGCGT TCGGGCGAGA GGAGGTCGCG CTCATGGCCT ACAACGCCGG CCCGAACCGC
ATCCTCGGCT ACCTGCGCGA CGGCGCGATC CCGGAGCGCT TCCACGCGTA CCCCCGCCGC
GTGCAGGCCG TGCACCGCAA GCTCCGCCGC GGCGCGGGCA CGCCTCCCTC CGCGCTGGCG
GTCGCGCGCG CGCCGGTGGC GGCGCCCTCG GGCCCGGCTC CGTGA
 
Protein sequence
MTPPRLHGLA GAAVAVAFVA SAVAFPGELS EEARQLAPAE LGPAASLVDA AGGALPAVAR 
IERQLGRRMP ALAEARRQAL ARTIVAEAQA ARIDPLLVLA LIQVESSFDP QAISGAGARG
LMQLREPTLR RELERAGLLH LDLHDPAANV VAGVRYLRRL LDAFGREEVA LMAYNAGPNR
ILGYLRDGAI PERFHAYPRR VQAVHRKLRR GAGTPPSALA VARAPVAAPS GPAP