Gene Anae109_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1152 
Symbol 
ID5376978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp1304625 
End bp1305317 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content78% 
IMG OID640842660 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001378344 
Protein GI153004019 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.83381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.407323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACT TCGGCCTGTC CCGGCTCGCC ATCGTGGCGC CTCCCTCCTG GGCGGGGCCG 
CCCCGGAGCG GGGGGCCAGG GACCGCCCAG GAGGACGTCC TCGCGCGTGC CCGCCGGCTC
GCGCGCCGGG CCTCGGACGT CCTCGAGGGG GCCGAGATCC ACGCCGACCT GAGGGGCGCG
CTCGGCCCCG CCGTCTGGGT CTGCGGCACG ACCTCGCGGG AGGTGGAGGG GCGGCCGCGG
CTCGATCCCG GGGAGCTCGC GGAGGAGGTC CTGCGGCGCA GCGCGCACGG GGAGGTGGCG
GTGGTGTTCG GGCAGGAGCG GCGCGGGCTC TCCGACGCGG AGCTCGAGCT CTGCCAGGCG
GTGTGCTCCA TCCCCACCGC GCCCGCCTAC GACTCGATGA ACCTGGCGCA GTCGGTGGCG
GTGCTCGCCT ACGAGATCGG GCGCCCGCGG CAGGTCCGCG CGCCGGCGCC CGCGGCGGCG
GAGCCCGCCC GGCACGCGAC GCTGGAGGCG CTGTGGGAAC GGCTGCAGGC GCTCCTCGGC
GAGGCGGGCT ACCTGAACCC GCAGAACCCG GAGCACATCC TCGCGGACCT GCGCCGCCTG
CTCGCGCGCG CGGAGCCCAC GCAGCGCGAG GTCGAGCTCG TCCTCGCCGC GGTGCGCGCG
CTCGAGCGGA AGCTGCGCGA GCGCGCGGGG TGA
 
Protein sequence
MKNFGLSRLA IVAPPSWAGP PRSGGPGTAQ EDVLARARRL ARRASDVLEG AEIHADLRGA 
LGPAVWVCGT TSREVEGRPR LDPGELAEEV LRRSAHGEVA VVFGQERRGL SDAELELCQA
VCSIPTAPAY DSMNLAQSVA VLAYEIGRPR QVRAPAPAAA EPARHATLEA LWERLQALLG
EAGYLNPQNP EHILADLRRL LARAEPTQRE VELVLAAVRA LERKLRERAG