| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_0486 |
|---|
| Symbol | |
|---|
| ID | 5377191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 547320 |
|---|
| End bp | 549566 |
|---|
| Gene Length | 2247 bp |
|---|
| Protein Length | 748 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640841995 |
|---|
| Product | lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001377685 |
|---|
| Protein GI | 153003360 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.608773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCGA CGGCAGCTCC CGCGCAGGAG GCCGAGGGCG ACGCTCCCGT CGCGGAGAGT
CAGCTCGAAG ACCTGCTGGA GAGCGCCTCG CGCTCGCAGG GGGTCACCCG CCGTTACACG
GAGGGCGACT TCGCGCCCTA CTTCGCCTCG GGCGAGCTCG CCGAGGCCAA GGCGCTCTTC
GACCGTGGCA GCCATGCGCG CGCACGCGCG CGGCTGCGTG GAGAGCAGCC GCCGGTGCGG
TACCTGCGCG CCGTGTCCGC GCTGCGCGAC GCCCCCGCCT CGGCGGTCGT CGAGCTCCGG
GCCCTCGCCG ACGACTACCC GCGGATGCGG GACCACTGCC TCTTCCACGC GGCACGCGCC
CTGGAGCGGC TGCGGAAGCG CCGCGCCGCC GCCGACGTCT ACGCGCAGGT GAGCCCCGGC
TCCACGCTCT ACGCCGAGGC CCGGCTCGGG CGCTCCCGGG TGCTCGAGCG CGGGCTGGAT
CTCGACGGGG CGCTCGACGC GCTCGTCCCG CTGCGCGAGC TGCCGGCCAT CCCTCGCCAC
GATGCGGTGA GACGGAAGGC GCTGCTCGCC GCCGCGCGGC TGTGCCAGAA GAAGGGCGAC
TACCCGTGCG AGCACCGGGC CATGCTCGAG CTGTGGGCCA CGAGCCCGCT CTCGCGCGAG
GCGAAGGTCG TCTGGGAACG CCTGAAGGAG CTCCCGATCC CGAACCGATG GCGGCTGCGG
CGAGCCGAGT CGTTCCTCGC GTTCCACGAC AACCTCGAGG CGTTGCGGCT GGCGCGGCAG
GTGAAGACCC CGCTGCCCGA CGAGCACGCC TGCACCGCGT CGTTCGTGAT CGGCAACGCG
CTCCGGAAGG AGCGGCAGCA CCGCAAGGCA GCCGCGGAGC TCGGACCGAT GGTCGAGGCG
TGCAAGAGCT CCGAGCTTCG GCCTCAGGCG ATGTACGTGC TCGGGTATTC GCAGTCGGTG
ATCGGGCAGG ACGCGGTGCG CACCTACGAG GCGCTGGCGC ACGAGTACCC CGGCCACGCC
TTCGCCGACG ACGCGCTGTT CTTCGCCGCC GAGCTCGACC TGCGCGGCGG ACGACGGGCC
GTCGCGCTGG AGCGACTCGA GCAGGTGGCC GCCCGCTACG CCACGGGCAA CTTCGCTCCC
GAGGCGCTCT TCCGGCTCGC GTGGGAGCAC CGGACGGCCG GCGCGCACGA GGAGGCGCTC
GCCGCGCTCG ACCGGCTGGA CCGCCTCCCC GGCCTCGGGC GCGAGCAGCG CCTCCGGTCG
CGCTACTGGC GGGCGCGCAC GCTCGCGGAC AAGGGCGACG CCGCGGCCGC GCCCGCGTTC
GCCGCGCTGG CCGCCGATCA CCCCGCGGAG TGGTACGGCC TGCTCGCCCG CGCGCGGCTC
CCCGACCTCG CGCCGCTCGT GGCGTCCCAC CGCACGGCGT CGTCCTACGC GGCGGCGACG
GTGTGGCCGC TGGAGGCGGG GCCGCTGGGG GACGACCCGC GGTTCCTCGC GGGGGTGGAG
CTCCTGCGGA TGCAGCTGCC CGACGGCGCG GCCGAGCTGC TCGCCATCGA TCGGCGCAGC
CTGCCCGAGG ACGCGGCGCG CCTGCTCGTG GAAGCCCTGC AGCGAAGCGG GAGCTCCGCG
GCCGCCGCCT ACGTCGCGCG CACCACGCTC GGGCGCACGC TGACGGGCGG GATCGACGAT
CGCACCGCCG ACGTCTGGCG CGCGACGTAC CCGCTGCCCT TCCGGAGCCT GGTCGAGCGA
TGGGCGAAGG CCTCGAGCGT CGATCCGGAT CTCCTGCAGG CGCTGATGCG GGAGGAGAGC
CGCTTCAACC CGTGGGCGCG CTCGGCGACC GGTGCCCGCG GCCTCACGCA GCTGATGCCG
CGCACCGCGC AGGACGTGGC GCGCGGGCTG AAGCTCGGCC GCGTGAACCC GGGCATGCTG
CACCGGCCTG CGCTCAACAT CCGCCTGGGC GCGGCCTACC TCGCGGAGCT GCTCTCGGAG
TACGAGGGCT CGATGGTCCG GGCGGTGGCG GCCTACAACG CGGGCCCGGT CGCGGTGTGG
CGATGGGTGC GGGCGAGGCC GGACGAGGAC GTCGACGTGT GGGTCGAGAA GATCCCCATC
ACGGAGACGC GGGACTACGT GAAGCGCGTC CTCGGGAGCT ACGGGGCGTA TCGTCACGTC
TACGGCAGGG GAGCCGGTCC GCTCGAGGAC CGCTCGCCTC GCGCCCGCGG CGATCGCGGG
GAGCCGAAGC CCGCGAGGCG CCTGTAG
|
|---|
| Protein sequence | MWATAAPAQE AEGDAPVAES QLEDLLESAS RSQGVTRRYT EGDFAPYFAS GELAEAKALF
DRGSHARARA RLRGEQPPVR YLRAVSALRD APASAVVELR ALADDYPRMR DHCLFHAARA
LERLRKRRAA ADVYAQVSPG STLYAEARLG RSRVLERGLD LDGALDALVP LRELPAIPRH
DAVRRKALLA AARLCQKKGD YPCEHRAMLE LWATSPLSRE AKVVWERLKE LPIPNRWRLR
RAESFLAFHD NLEALRLARQ VKTPLPDEHA CTASFVIGNA LRKERQHRKA AAELGPMVEA
CKSSELRPQA MYVLGYSQSV IGQDAVRTYE ALAHEYPGHA FADDALFFAA ELDLRGGRRA
VALERLEQVA ARYATGNFAP EALFRLAWEH RTAGAHEEAL AALDRLDRLP GLGREQRLRS
RYWRARTLAD KGDAAAAPAF AALAADHPAE WYGLLARARL PDLAPLVASH RTASSYAAAT
VWPLEAGPLG DDPRFLAGVE LLRMQLPDGA AELLAIDRRS LPEDAARLLV EALQRSGSSA
AAAYVARTTL GRTLTGGIDD RTADVWRATY PLPFRSLVER WAKASSVDPD LLQALMREES
RFNPWARSAT GARGLTQLMP RTAQDVARGL KLGRVNPGML HRPALNIRLG AAYLAELLSE
YEGSMVRAVA AYNAGPVAVW RWVRARPDED VDVWVEKIPI TETRDYVKRV LGSYGAYRHV
YGRGAGPLED RSPRARGDRG EPKPARRL
|
|---|
| |