Gene Anae109_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_0252 
Symbol 
ID5377634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp290307 
End bp291689 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content75% 
IMG OID640841764 
ProductMATE efflux family protein 
Protein accessionYP_001377454 
Protein GI153003129 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC CTCACCCGTC CGAGCGCACG CGCGCCTCCG GGCGCAGCGC GATCCTGCGC 
CCCCTCCTCG CGCTCGCCTG GCCCATGGTG GTCTCCCGCG CCACCCAGGT CGTGGTGGGC
ATCGCGGACG CCGTGATGGT CGCCCACCTC GGCGAGGCGG CGCTCGCGGC GACGACCACG
GGAGCGACGA ACGCCTTCTC GATCGTCATC CTGCCGATGG GGATCGTGTT CGTCGTCCAG
AGCTTCGCGT CCCAGCTCTT CGGGCGCGGC GACCTCGCCG GGGCGCGGCG CTTCGGCTGG
TACGGGCTCG CCGTCGCCGC GGGCGCGCAG GTGCTCGGCG TGCTGGGCAC GCTCGCGACG
CCGCGCGCCC TCGAGGCCTT CGCCTACGCG CCGGACGTGC GCGCGCTCAT GAGCGGCTAC
CTCCAGATCC GGCTCCTCTC GGCCGGCGCG GTGGTGGGGC TGGAGGCGCT CTCGAACTAC
TACGGCGGCC TGGGCGACAC GCGGCTGCCG ATGCGCGCGA ACCTCGCGGC GATGGTGCTG
AACGTGGCAG GCAACTGGCT CCTCATCGAC GGGCGGCTGG GGCTGCCCGC GCTCGGCGTC
ACGGGCGCCG CCGTCGCGAG CACCCTCTCG ACCGCGCTCG CGTTCGCCGG GCTCCTGGCG
GTGTTCGTGC GCGAGGGACG CCGGACCGGG ACCGGGACGC TCCGCGCCCG GGAGCTCGGG
CGGCTGCTCC GCTTCGGCGT GCCGTCCGGC GTCAACTGGT TCTTCGAGGT CCTGGCCTTC
GTCTTCTTCG TGAACGTGGT GTTCGTCGAG CTCGGGACGA CGTCGCTCGC GGCCCTCATG
GCGATCCTCC AGGTGAACAC GGTCGCGTTC ATGCCCGCGT GGGCGCTCGC GAGCGCGGGC
GCCATCCTGG TGGGTCAGGC GATCGGCGCG TCCCACGCCG ACCGCGTCCC GCGCCTCGTG
GCGGTCACGT TCGCGGTGAG CGCCGCCTGG CAGCTCTTCG TCGGCGCCCT GTACGTCCTC
GCGCCGGAGG CGATCCTCGC GCCGTTCGCG ACCGGCGCCG GACCGGGGAG CGCCTTCGTC
GCGATCGGCC GGCGCGTGCT GCTCCTCGCG GCGGCCTGGC AGCTCTTCGA CGCCGCCGCG
ATGTCGCTCG GAGAGGCGCT GAGGGCGGCG GGCGACACCG CGTTCGTCAT GTGGATGCGG
GTCACCCTCG GCTGGGCGGT CTTCGTCCCG GGGACCTGGA TCTCGGTGCG CGAGCTCGGC
GCGGGCGAGG TGGTCGCCGT GGGATGGCTG GTGCTGTGGC TGGCGCTGCT CGCCCTGGCG
CTCCTGCTGC GCTTCCGCTC CGGCGCCTGG CGGCGGATCG AGCTCGTGCC CGAGGCGCCC
TGA
 
Protein sequence
MDAPHPSERT RASGRSAILR PLLALAWPMV VSRATQVVVG IADAVMVAHL GEAALAATTT 
GATNAFSIVI LPMGIVFVVQ SFASQLFGRG DLAGARRFGW YGLAVAAGAQ VLGVLGTLAT
PRALEAFAYA PDVRALMSGY LQIRLLSAGA VVGLEALSNY YGGLGDTRLP MRANLAAMVL
NVAGNWLLID GRLGLPALGV TGAAVASTLS TALAFAGLLA VFVREGRRTG TGTLRARELG
RLLRFGVPSG VNWFFEVLAF VFFVNVVFVE LGTTSLAALM AILQVNTVAF MPAWALASAG
AILVGQAIGA SHADRVPRLV AVTFAVSAAW QLFVGALYVL APEAILAPFA TGAGPGSAFV
AIGRRVLLLA AAWQLFDAAA MSLGEALRAA GDTAFVMWMR VTLGWAVFVP GTWISVRELG
AGEVVAVGWL VLWLALLALA LLLRFRSGAW RRIELVPEAP