Gene Bcer98_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3787 
Symbol 
ID5344564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3847553 
End bp3848740 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content38% 
IMG OID640841276 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001376972 
Protein GI152977455 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACCAA ACACGGTTCG TACTCCAAAC AAAAAAAAGA AATGGATGAT CATTGGGATT 
ATTACATTAA TTGTTGTCGT TGCAGCGATT AACATTTTCG TCATGCAAAA TAAGAAGGGC
GAGGCGAAGG CGGATGCTAT TAGTTTCGAA AAAGTAACAG AGCGTAAGCT AAATAATACG
AAATTAATTG CAGGACAAGT AAAGCCAGGA AATATCGAAA GTTTCTATGC AGATCCAACA
AAAGGGAAAG TGAAAGATAT TGCCGTAAAA GAAGGGCAAG AAGTTGAAAA GGGAACGAAG
TTATTCTCTT ATGATAATGA AGAAATCAAT TTGCAAATAC AACAAGCCGA GCTTGAGCAA
AAAATGGCAA CGATGCGTTA TGATCAGACG CAGAAGAAAA TAGATTCATT GAAGAAAGAG
GTTAAGAAAG CGAAAGACAG CGGCGCTGGA AAAGAAGTGA CAGAGCCGAT GGAAGAGCAA
GTAAGTGAAT TAGAATTACA GCAAAAAACA GCGGATCTTG AAAAAGAAAA AGGTAAGTTG
CAGGTAGAAG AATTACAGAA AAAACAGAAA GAACTTACGA TTTATAGCAA CTTTGCAGGT
GTTGTACAAA AGCTAGATAA AGATGCAGCG CAAAGTTCCT CACAAGCGAT GGGTGGACAA
GGAAAAGCAT TTTTACAAAT CGCTTCTAAA GAGCCATTCC AAATTCAAGG GACATTAACG
GAGCTTCAAA AATCACAAAT TCAAAAAGAT CAAACATTTA CTGTAACAGC GAAAGCAAAC
AGTAAGAAAA AATGGACAGG TAAGATTATA GAGGTAAGTG AGTTCCCAAC AAGTGCAGAG
ATGGCACAAG CGGCAGGAGC AGGTGAAGCG ACGCAAAATA TGTCTCAATA TACATATAAA
GCAAGCCTTG ATAGTCAAGA TGGTTTATCT CCAGGTTATC ATGTGTCACT TCAAGTCAAT
TTAGAAAATA AGAAAATGAT TGCTGTTCCA AGCAAGAGCA TTGTTGAAAA AGGTGACGAT
GCATTTGTAT ATGTAGAAGA AAAAGGAAAG CTTCGTAAGC AAAATGTGAA GAAAGGGTCT
ACTGATGGAG ATTGGACAGA AGTTCTTGAA GGTGTAACAG TGGGACAAAA GGTGGTTAAA
AATCCTTCCG ACAAAGTGTA TGACGGAATG GAAGTGAAAG AAAAATGA
 
Protein sequence
MLPNTVRTPN KKKKWMIIGI ITLIVVVAAI NIFVMQNKKG EAKADAISFE KVTERKLNNT 
KLIAGQVKPG NIESFYADPT KGKVKDIAVK EGQEVEKGTK LFSYDNEEIN LQIQQAELEQ
KMATMRYDQT QKKIDSLKKE VKKAKDSGAG KEVTEPMEEQ VSELELQQKT ADLEKEKGKL
QVEELQKKQK ELTIYSNFAG VVQKLDKDAA QSSSQAMGGQ GKAFLQIASK EPFQIQGTLT
ELQKSQIQKD QTFTVTAKAN SKKKWTGKII EVSEFPTSAE MAQAAGAGEA TQNMSQYTYK
ASLDSQDGLS PGYHVSLQVN LENKKMIAVP SKSIVEKGDD AFVYVEEKGK LRKQNVKKGS
TDGDWTEVLE GVTVGQKVVK NPSDKVYDGM EVKEK