Gene Bcer98_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3116 
Symbol 
ID5345895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand+ 
Start bp3160919 
End bp3161569 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content34% 
IMG OID640840610 
Producttranscription factor RsfA 
Protein accessionYP_001376335 
Protein GI152976818 
COG category 
COG ID 
TIGRFAM ID[TIGR02894] transcription factor, RsfA family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.153698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGC GCCAAGATGC ATGGACGAAA GAAGATGATT TCCTGTTAGC AGAAACCGTA 
TTACGACATA TTCGTAGCGG AAGTACACAG TTAAAAGCGT TTGATGAAGT TGGAGATCAG 
TTAAACCGAA CGTCCGCAGC GTGCGGATTT AGATGGAATG CAGAAGTTCG ACAAAATTAT 
GAAGAGGCCA TACAACTTGC AAAAAAACAA AGAAAAGAAT TAAAACGTTC GGAAGCTAGA 
ATAGAAAAAG AAAAATATCT CAAAACAAAA GAAGAAAAGC AACTTATAAT CAATGCCAAA 
AGTTCAGAGG ACATTCCAAG CAACTTAAAA TCACTTACAA TGCAAGATGT CATTTCATTT 
TTACAAAATA TAGAACAACA TCAACCTTCA CTTACAAAGT TACAAAATGA AAATAAAATA 
TTGCAAACAA AGCTTACTTC TTTACAAAAA ATAAATGATG AGCTTGAAAC AAAATTAGTT 
GCTCTAACAA AGCAACAACA AACGATTGAG AAAGATTACG CAATGCTTGT AAGAATTATG 
GATCGCGCAC GTCATCTCGT TTCAAAAGAT CAGCAAACAG AACAAATCGC CCCTATTTTT 
AAAACGGATC AAAATGGAGA TTTGGATATT ATATGTTCGG CCGAAAACTA A
 
Protein sequence
MKTRQDAWTK EDDFLLAETV LRHIRSGSTQ LKAFDEVGDQ LNRTSAACGF RWNAEVRQNY 
EEAIQLAKKQ RKELKRSEAR IEKEKYLKTK EEKQLIINAK SSEDIPSNLK SLTMQDVISF 
LQNIEQHQPS LTKLQNENKI LQTKLTSLQK INDELETKLV ALTKQQQTIE KDYAMLVRIM 
DRARHLVSKD QQTEQIAPIF KTDQNGDLDI ICSAEN