| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_2616 |
|---|
| Symbol | |
|---|
| ID | 5346726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 2709276 |
|---|
| End bp | 2710241 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640840119 |
|---|
| Product | primosome, DnaD subunit |
|---|
| Protein accession | YP_001375845 |
|---|
| Protein GI | 152976328 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3935] Putative primosome component and related proteins |
|---|
| TIGRFAM ID | [TIGR01446] DnaD and phage-associated domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00360239 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATG TTGTATCTGA AATTGGAGGA TTGAACCTGA AAGGAAATGT GGTAGATCAC
GAATGGTTTA ATTACATCAC TTTTAGTAAC GGAAAACCTC ACATAGTAGC AATTATGGTT
TTAAGTGAAA TTGTTTATTG GTATAGACCT ACAGTTATTC GAGATGAAAT AACAGGGAAG
GTCACATATA AGAAAAAATT CAAGGCAGAT AAATTACAGA AGAACTATCA ACAATTAGCT
GATACATTTG GTTTTTCAAA ATTGCAGGTA AAGAGAGCGT GTGATTTATT AACGGACATG
CTGCTTATAA AAATTGAGTT TCGTACTATC AATGTTGATG GAAAAGTCTT GAATAATGTG
ATGTTTGTAG AACCAGTAGC ATCAGAAATC AAAAAGATTT CTAGCATGTA TCAACAAATA
GAAATAGACC CTCCTTACTT TGAAGTAAAG AGGGACCCTA CTTCAAAGTT ACCACCCTCC
TTACTTGAAA GTAAGGACCC TCCCTACTTT GAAGTAAGGA CAAATACAGA GAATACTACA
GAGATTACTA CAAATATAGA TGATGATGAT AATCCACATC CGTTAATTGA TCTACAGTTT
AAAAATAGCT TGGAACATCT GATGAAGAAT AGCATCCCGT TAAGTGTAAT TGCGGAGCAA
GAATTAGGTG AATTTTGCGA CTTATTTGGC AGTGAGTTGG TGAATGCAGC AGTTGATAAA
GCACTTGATG AAAATGCTCC AAGATGGACA TATATTCGAA CAATTTTAAG TAATTGGCAA
AAGAACAACG TTAAAACACT GGCAGATGTT ATCAAACTCG ATGAAGATTA TAAAAACCGA
AGAGGTGGTG TAGGAAATGC AGCACATCGG AAGCGCACTG GCAGAGGTTA TGCAGCGAGC
AGAAATTATG AAGAGGAAAA TGCAAATAGA AAGCGGAACA TGCCGAGCTT CATTAAACGA
GTATAA
|
|---|
| Protein sequence | MSNVVSEIGG LNLKGNVVDH EWFNYITFSN GKPHIVAIMV LSEIVYWYRP TVIRDEITGK
VTYKKKFKAD KLQKNYQQLA DTFGFSKLQV KRACDLLTDM LLIKIEFRTI NVDGKVLNNV
MFVEPVASEI KKISSMYQQI EIDPPYFEVK RDPTSKLPPS LLESKDPPYF EVRTNTENTT
EITTNIDDDD NPHPLIDLQF KNSLEHLMKN SIPLSVIAEQ ELGEFCDLFG SELVNAAVDK
ALDENAPRWT YIRTILSNWQ KNNVKTLADV IKLDEDYKNR RGGVGNAAHR KRTGRGYAAS
RNYEEENANR KRNMPSFIKR V
|
|---|
| |