| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1749 |
|---|
| Symbol | |
|---|
| ID | 5343517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 1860834 |
|---|
| End bp | 1861622 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640839318 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001375044 |
|---|
| Protein GI | 152975527 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.136733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA ATGATCTTAT CATATTTAAA ACTGTAGTAA GTGAAGGGTC AATTAGTAAG
GCTGCAAAAG AATTAGGTTA TGTTCAACCA AATGTAACTG AACGAATTAA AAGATTAGAA
CAAGAATTAG AAACACCACT ACTACATAGA AATAACAAAG GTGTTTCCCT ATTGCCATCA
GGCGATATTT TGTTAGATTA TACTAATAAA ATATTAAATC TAATAGAGGA AGCCAAAAAT
GAAGTTAAAA TGAGTGACGC TTCTTATCGA ATAGCAACGT CACAGTCTAT TTTGTCAGAT
TATTTAAGTA TACGTATCAA AGAAAATTTC AGGAATTATC AAATATATAT GGAAAGTAAT
AATTATTTGC ACCAACTATT AAAGAAACAA AGAGTTGATA TGGTCATAAC TTATGAGGAT
TACTCTGATC CAGTATTTCA AAAAGCATTT AGTTCAACAA TTTCTATGGG TTTACTAAAA
GCAAAAGGAT TATCCAATAT TGAATATTCA AAGGAATTCT TTTTTGTTAG CCATGATAAA
CAATGTCCCT TTAGAAATTA TACAATCGAA TTCATAAAGA AGAATAACCT TTCTCAAAAG
CAGCTTCAGC AACTAGATTC TTATTCACTT ATTAAGGAAT TTATTGCCCA AGGAAAGGGA
TTAGCTTTTT TACCCATTTG TAATGGTAAC TTAGAACCAA TTAAAGAAGT ACCAATAGAA
AAAATACCTA TTTATTTTTT TACGATTCGA GAATCAAAAA AAATGATTCC AAGAGAGCTA
TTTAATTAA
|
|---|
| Protein sequence | MEINDLIIFK TVVSEGSISK AAKELGYVQP NVTERIKRLE QELETPLLHR NNKGVSLLPS
GDILLDYTNK ILNLIEEAKN EVKMSDASYR IATSQSILSD YLSIRIKENF RNYQIYMESN
NYLHQLLKKQ RVDMVITYED YSDPVFQKAF SSTISMGLLK AKGLSNIEYS KEFFFVSHDK
QCPFRNYTIE FIKKNNLSQK QLQQLDSYSL IKEFIAQGKG LAFLPICNGN LEPIKEVPIE
KIPIYFFTIR ESKKMIPREL FN
|
|---|
| |