Gene Bcer98_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0654 
Symbol 
ID5346067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp744631 
End bp745734 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content36% 
IMG OID640838268 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001373996 
Protein GI152974479 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AAAATAAGGT ATTCATTACG AGTGTAGTAG CAATTGGAAT CGCAGCAGGT 
TCCTATTTTG CTTTTACTGG AGGCTCTTCT GATGTAGCAA TCGCCTATAG TGGTTATAAA
GTAACCGAAA AGCAAATTGA AAACACACAA AAATTCGGCG GTGAAGTCAT TCCAAATGGG
ATGGAGACAA TTGCATTCGA TCCATCAAAA GGAACTTATG AACTAGCTGT CCAAAAAGGC
GATGAAGTGA AAAAAGGGCA ACTTCTTTTC ACGTACAATG ACCCTACTAT GAAATTAAGT
GTTACAGAGG CAGAAATGCA AAAGAAATTA GCTGAAAAAG AAGTAACATT ATTAAAGAAA
CAAATTGATA CAGCAAAACA AACATTACAA AAAAACAAAA ACGCTGGAGC ACCTCAAGAA
ATGCTAAAAG CGGCAGAAAC GGAAGTACAA CAGCTTGAAT CACAACTTGA AATAAAAAAA
TTTGAAGTCG AAAAAGCGGA ACAAATGATA AAAACAAACA AAGAAAAATT AACTACTCTT
TCGGTAACAA GCCCTGTAGA TGGTTTCATT GATGAGATTA CCAAAAATAC GGATGAAAAA
ACAGGTCTAA ACGGGATTAC AATTCGTCAC ACTGGTCCAT TAAAAGTAAA AGGACAACTG
TCAGAGTTCG AATTAGCTCA TGTCAAAGTC GGGCAAGAAG TGACCATTAC TTCCAAAACA
GTACCAGGAA AAAAATGGAC TGGAAAAGTA ACAGAACTCT CTTCAACACC GATCAAAAGC
ATGGATGAAA ACAAAACCGT TTCTAATTAC CAATTTATTG TTACATTAGA TAATAGCGAA
GACTTGCAAA ATGGATTCCA TGTATATGTA ACAAATACAT CCGGTGCAGC AACTGGCACT
GTTATCCCCA AAAGTAGCAT TGTGAAAAAA GGGGATAAAA ACGTTGTCTT TGTTATGAAA
GATGGAAAGG TAAAAGAACA ACCAATCACT GTTGAATTCG AAACAGATAG CGAAGCAAAA
GTTTCCGGTG TAAAAAAAGG AGAACAAATC GTTTCTAAAC CTGATAAAGA CTTAAAAGAT
GGCATGGAGG TCAACACCCA ATGA
 
Protein sequence
MKKKNKVFIT SVVAIGIAAG SYFAFTGGSS DVAIAYSGYK VTEKQIENTQ KFGGEVIPNG 
METIAFDPSK GTYELAVQKG DEVKKGQLLF TYNDPTMKLS VTEAEMQKKL AEKEVTLLKK
QIDTAKQTLQ KNKNAGAPQE MLKAAETEVQ QLESQLEIKK FEVEKAEQMI KTNKEKLTTL
SVTSPVDGFI DEITKNTDEK TGLNGITIRH TGPLKVKGQL SEFELAHVKV GQEVTITSKT
VPGKKWTGKV TELSSTPIKS MDENKTVSNY QFIVTLDNSE DLQNGFHVYV TNTSGAATGT
VIPKSSIVKK GDKNVVFVMK DGKVKEQPIT VEFETDSEAK VSGVKKGEQI VSKPDKDLKD
GMEVNTQ