| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4850 |
|---|
| Symbol | |
|---|
| ID | 5383342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009672 |
|---|
| Strand | - |
|---|
| Start bp | 28328 |
|---|
| End bp | 29131 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640837510 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001373350 |
|---|
| Protein GI | 153012140 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.242595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTT ATGCTTTTGC AGTTTATCTG TTCCTCTATC TTCCTATCGG GATTATCGCG
CTGTTCAGCT TTTCTGCGGG CCGATCGGCG AGCCAGCTTC AGGGTTTCTC GACGCAATGG
TATTCCAAGG CACTCGACAA CCCATTCGTT ATCGATGCTC TCAAGACTTC GGCATCAGTC
GCGTTGACAT CGGCGTTCCT GTCTTGCCTG CTTGGCACGA TGGCTGCGAT TGCATTGACG
GGCCTGAAAG GAAAATTGCG CGTTCTCTTT GATGCCCTCA TCTATATTGC AGTGATGATC
CCAGGCATTG TCATCGGCAT TGCAACGCTG ATCGCGTTGG TGACCGTATT CAACACCGTT
AATCCCTGGC TTCAGGCGGT GACGGGTTTG AAGCTCTCTT TGGGGTATGG CTCGCTCATA
GCGGCGCATG TGCTGTTCAC CATGTCTCTC GTTATCATTC TGGTGCGTGC CCGTATCGAC
GGCATGGATC GTTCTTTGCT GGAAGCTTCC TTCGATCTCG GTGCAGGGCC AATCGGCACC
TTCCGGCAAG TAACCCTGCC AATGCTGATG CCTGCGATAA TGGCCGGATT CCTGCTCAGT
TTCACCTTCA GTTTCGATGA TTTCATCATC GCTTTCTTTG TTGCCGGGCC AGAAACGACC
CTTCCGATCT ACATCTTTTC GTCAATCCGT CGCGGAGTGA CGCCGGAGAT CAATGCCATC
GGCACGATGG TAATGGTGTT CTCTCTGCTG CTGCTTGTCT TCGCACAAAT CATTCTCCGG
CGCGGGAAAC CGGCAGGTCA TTAG
|
|---|
| Protein sequence | MRIYAFAVYL FLYLPIGIIA LFSFSAGRSA SQLQGFSTQW YSKALDNPFV IDALKTSASV
ALTSAFLSCL LGTMAAIALT GLKGKLRVLF DALIYIAVMI PGIVIGIATL IALVTVFNTV
NPWLQAVTGL KLSLGYGSLI AAHVLFTMSL VIILVRARID GMDRSLLEAS FDLGAGPIGT
FRQVTLPMLM PAIMAGFLLS FTFSFDDFII AFFVAGPETT LPIYIFSSIR RGVTPEINAI
GTMVMVFSLL LLVFAQIILR RGKPAGH
|
|---|
| |