Gene Oant_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_4439 
Symbol 
ID5381680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1873397 
End bp1874443 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID640837128 
ProductABC transporter related 
Protein accessionYP_001372968 
Protein GI153011754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTT TGACCCTTTC CGGAATTTCC CGCCACTACG GCAAGTTCGC GGCTGTCGAC 
AATTTCAACT TGGCGATTGA AAAGGGCGAG TTCATTTCGC TTCTCGGTCC TTCCGGCTGC
GGCAAGACCA CGACCTTGCA GATGATCGCC GGGCTGGTGA CGCCGACGGC AGGTTCCATC
ACGCTTGACG GACGTGAAAT CACGCGCCTT GCTCCGGCCA AGCGCGAACT CGGCGTTGTC
TTCCAGAGCT ATGCGCTGTT TCCACATATG ACGGTTGCGC AGAATGTGAG CTTCGGCCTT
GAAATGCGCA AAGTGCCAAA GGCAGAGCGC GAAAAGCGCG TTCGCGACGT GCTGGAACTG
GTGCATCTCA GCGCACTTGC CGATCGTTAT CCGCGTGAAA TGTCGGGCGG TCAGCGCCAG
CGTGTGGCCA TTGCCCGTGC GTTGGTCATC AATCCGCCGG TCTTGCTGCT CGACGAGCCG
CTTTCCAATC TGGATGCGCA GCTGCGTGAA GAAATGCAGT TCGAGCTGCG TCGCATCCAG
CGTACTGTCG GCATTACCAC CATCATGGTG ACGCATGATC AGGCCGAAGC GCTTTCGATC
AGCGATCGCA TCGTGGTTAT GGAAAAGGGC GTCATCACGC AGGTCGATGC GCCCTACAAG
CTCTATGAGC ATCCGCATAA CCACTTCATT TCCAACTTCG TCGGCAAGTC GAACTTCCTG
AAGGCGCGCG CTGAAGGCGA TATGATCGCG CTGGCCGAAA CGACAATCCG CTTCCCTGCA
AATGGCAAAC AGGTTTCCGG CGAGCTTTCT GTCTTCATCC GTCCTGAAAA GGTGCAGCTC
GTTGCAGCGG GTGAGGGGCA TGTCGCCGGT GAAGTGACGA CGCGCTACTT CATGGGTGCG
CAGTGGCTGC TCGGCGTGAC CACGCCTGCG GGCCAGCTTT CGGTGGCCCT GCCCAATCTT
GGCAACCCAC CGCCATCGGA AGGCACATCG GTCGGCCTCA GCTGGAACCA TGAGGATTGC
CGTATCCTCA CCGCAGGGGT GAACTGA
 
Protein sequence
MSFLTLSGIS RHYGKFAAVD NFNLAIEKGE FISLLGPSGC GKTTTLQMIA GLVTPTAGSI 
TLDGREITRL APAKRELGVV FQSYALFPHM TVAQNVSFGL EMRKVPKAER EKRVRDVLEL
VHLSALADRY PREMSGGQRQ RVAIARALVI NPPVLLLDEP LSNLDAQLRE EMQFELRRIQ
RTVGITTIMV THDQAEALSI SDRIVVMEKG VITQVDAPYK LYEHPHNHFI SNFVGKSNFL
KARAEGDMIA LAETTIRFPA NGKQVSGELS VFIRPEKVQL VAAGEGHVAG EVTTRYFMGA
QWLLGVTTPA GQLSVALPNL GNPPPSEGTS VGLSWNHEDC RILTAGVN