Gene Oant_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3998 
Symbol 
ID5381234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp1415057 
End bp1416226 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID640836684 
Productextracellular ligand-binding receptor 
Protein accessionYP_001372532 
Protein GI153011318 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0350284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT CGACGAAAGC GGCCTTCGCG CTGCTCGCCG CAACCATGTT GAACGGAACC 
GCGCAGGCCG AAGAAGGCAA GATCAAGATC GGTTTGATCT ATACGCTGAG CGGGCCAGCG
GCCTTGCTGG GCGAACAATC CCGCGACGGT TTTCTGCTTG CCATGGACAA GCTGGGCAAC
AAGCTCGGCG GCCTCGATGC TGAAATCATC ATTCAGGACG ATGAGCAGAA GCCGGATATC
GGCGTCAACA AGGTCCAGCA GATGATCCAG CGCGACAAAG TGGATTTTGT CGTAGGCCCC
ATCTTCTCCA ATGTCCTGAA CGCTATCGTC AAACCAGCGA CCGATTCCGG CACGTTTCTG
ATCTCGACCA ATGCAGGCAC GTCCAATCTG GCCGGCAAGG ATTGCAACCC CAATCTGTTC
GTCACCTCCT ATCAGAACGA CCAGATGCAT GAAGTTTCCG GCAAATATGC CGAAAAGCAG
AACTACCAGC GCGTCGTGCT GATCGCCCCG AATTATCAGG CTGGCAAGGA CGCTCTGGCC
GGTTTCAAGC ATTCCTACAA GAACGAAGTC GCGCAGGAAA TCTATGTGCC GCTTGGCCAG
CTCGACTATT CGGCAGAACT CGCCCAGATC GCAGCCGAAC AGCCTGACGC GGTCTATGCT
TTCCTGCCCG GCGGCATGGG CGTAAATTTC GTCAAACAGT ATCGTCAGGC CGGTCTTGAA
GGCACCCCGT TCCTTTCGGC ATTCACCGTG GATGAGACCA CCCTGCCCGC GCAGCAGGAT
GCGGCAGTTG GCTTCTTCGC CGGTTCGAAC TGGGCGCCGG ATCTTGATTC CGCACCAGCC
AAGGAATTTG CCGCCGCCTA TGAAGCCAAA TTCAAGCGCA TTCCGGCGAC TTTTGCGGTG
CAGGCTTATG ACGCCGCCAT GCTGATCGAT GCGGCCGTCA AGCAGGTCAA CGGCAATATT
GCCGACAAGG ATGCCTTGCG GGCCGCCATG AAAGACGCGA AATTCACCTC GCCGCGCGGT
GAATTCAGCT TTGGCGACAA CCACTTTCCG ATCCAGAATT TCTACCTGAC CAAAGTCGTC
AAGCGTGACG ACGGCCAGTT CGCCACGTCC TACGTTGAAA CGGTCTTCAA CGATTACAAG
GATAATTACG CAGCTGAATG CAAGATGTAA
 
Protein sequence
MKISTKAAFA LLAATMLNGT AQAEEGKIKI GLIYTLSGPA ALLGEQSRDG FLLAMDKLGN 
KLGGLDAEII IQDDEQKPDI GVNKVQQMIQ RDKVDFVVGP IFSNVLNAIV KPATDSGTFL
ISTNAGTSNL AGKDCNPNLF VTSYQNDQMH EVSGKYAEKQ NYQRVVLIAP NYQAGKDALA
GFKHSYKNEV AQEIYVPLGQ LDYSAELAQI AAEQPDAVYA FLPGGMGVNF VKQYRQAGLE
GTPFLSAFTV DETTLPAQQD AAVGFFAGSN WAPDLDSAPA KEFAAAYEAK FKRIPATFAV
QAYDAAMLID AAVKQVNGNI ADKDALRAAM KDAKFTSPRG EFSFGDNHFP IQNFYLTKVV
KRDDGQFATS YVETVFNDYK DNYAAECKM