Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3998 |
Symbol | |
ID | 5381234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1415057 |
End bp | 1416226 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640836684 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001372532 |
Protein GI | 153011318 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0350284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT CGACGAAAGC GGCCTTCGCG CTGCTCGCCG CAACCATGTT GAACGGAACC GCGCAGGCCG AAGAAGGCAA GATCAAGATC GGTTTGATCT ATACGCTGAG CGGGCCAGCG GCCTTGCTGG GCGAACAATC CCGCGACGGT TTTCTGCTTG CCATGGACAA GCTGGGCAAC AAGCTCGGCG GCCTCGATGC TGAAATCATC ATTCAGGACG ATGAGCAGAA GCCGGATATC GGCGTCAACA AGGTCCAGCA GATGATCCAG CGCGACAAAG TGGATTTTGT CGTAGGCCCC ATCTTCTCCA ATGTCCTGAA CGCTATCGTC AAACCAGCGA CCGATTCCGG CACGTTTCTG ATCTCGACCA ATGCAGGCAC GTCCAATCTG GCCGGCAAGG ATTGCAACCC CAATCTGTTC GTCACCTCCT ATCAGAACGA CCAGATGCAT GAAGTTTCCG GCAAATATGC CGAAAAGCAG AACTACCAGC GCGTCGTGCT GATCGCCCCG AATTATCAGG CTGGCAAGGA CGCTCTGGCC GGTTTCAAGC ATTCCTACAA GAACGAAGTC GCGCAGGAAA TCTATGTGCC GCTTGGCCAG CTCGACTATT CGGCAGAACT CGCCCAGATC GCAGCCGAAC AGCCTGACGC GGTCTATGCT TTCCTGCCCG GCGGCATGGG CGTAAATTTC GTCAAACAGT ATCGTCAGGC CGGTCTTGAA GGCACCCCGT TCCTTTCGGC ATTCACCGTG GATGAGACCA CCCTGCCCGC GCAGCAGGAT GCGGCAGTTG GCTTCTTCGC CGGTTCGAAC TGGGCGCCGG ATCTTGATTC CGCACCAGCC AAGGAATTTG CCGCCGCCTA TGAAGCCAAA TTCAAGCGCA TTCCGGCGAC TTTTGCGGTG CAGGCTTATG ACGCCGCCAT GCTGATCGAT GCGGCCGTCA AGCAGGTCAA CGGCAATATT GCCGACAAGG ATGCCTTGCG GGCCGCCATG AAAGACGCGA AATTCACCTC GCCGCGCGGT GAATTCAGCT TTGGCGACAA CCACTTTCCG ATCCAGAATT TCTACCTGAC CAAAGTCGTC AAGCGTGACG ACGGCCAGTT CGCCACGTCC TACGTTGAAA CGGTCTTCAA CGATTACAAG GATAATTACG CAGCTGAATG CAAGATGTAA
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Protein sequence | MKISTKAAFA LLAATMLNGT AQAEEGKIKI GLIYTLSGPA ALLGEQSRDG FLLAMDKLGN KLGGLDAEII IQDDEQKPDI GVNKVQQMIQ RDKVDFVVGP IFSNVLNAIV KPATDSGTFL ISTNAGTSNL AGKDCNPNLF VTSYQNDQMH EVSGKYAEKQ NYQRVVLIAP NYQAGKDALA GFKHSYKNEV AQEIYVPLGQ LDYSAELAQI AAEQPDAVYA FLPGGMGVNF VKQYRQAGLE GTPFLSAFTV DETTLPAQQD AAVGFFAGSN WAPDLDSAPA KEFAAAYEAK FKRIPATFAV QAYDAAMLID AAVKQVNGNI ADKDALRAAM KDAKFTSPRG EFSFGDNHFP IQNFYLTKVV KRDDGQFATS YVETVFNDYK DNYAAECKM
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