Gene Oant_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3196 
Symbol 
ID5382361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand
Start bp521109 
End bp522335 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID640835879 
Productmajor facilitator transporter 
Protein accessionYP_001371733 
Protein GI153010519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.881104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACAA ACCTGCCGGC TCAAACGGGC CTGTCTCCCG ACGCGAGAAG GTGGCCCGTC 
ATCTCCGCGC TCGGCATCGT ACAGATATTT GCATGGGGCA GCTCCTATTA CCTGCTCGCC
GTTCTCGCCG CCCCGATCGC GGCCGATACG GGTTGGCCGC TTTCATGGAT CGTCGGCGCT
CTCTCCATTG GCCTGCTCGC GGCCGGCGTC GTTTCCCCGC GCGTGGGTGA CGCCATTGGC
CAGCACGGCG GGCGTCCCAT CCTTGCTCTG GCTTGCCTGC TGTTCGCTGC CGGCCTCGTC
ATCCTTGCGG CTGCGCCGTC CCTATGGGTA TTCGTCGCCG GATGGATCGT GCTCGGTATC
GGCATGGGGG CCGGCCTTTA TGATGCGGCA TTTGCCACGC TCGGGGGCTA TTATGGCCGT
TCCGCGCGAT CCGCCATCAC TACACTGACC TTGTGGGGCG GCTTCGCAAG CACGGTCTGC
TGGCCGCTCT CGGCCTTGTT TCTGGAGCAT CTGGGATGGC GCGGGGCCTG CATGGCCTAT
GCCGGCATTC ATCTCGCGAT CTGCCTGCCG CTCGTGCTGC TGGTCCTTCC GAGCAACGGC
AAGCCCAGGC CGATCGGTGG CAAAGACCAA GCTCCTGCGA TCAAGCTGCG CGACCATGAG
CGCCGGGCCT ATCTGATCAT GATGGCGATC GTGGTGCTGG CCGGATTGGG CGTCACCATC
ATATCGGTGC ATCTGCTGAC CCTGTTGCAG CAACGCGGGC TGTCGCTGGG CGAAGCTGTA
GCCCTCGGCG CGCTGATAGG CCCGGCCCAA GTCGCCGGCC GAATTGGCGA AATGGCGAGC
GGGGGGAGGC ATCATCCCTT CTGGACACTC GCGGCCGCCT CCGTCCTGAG CGCGGCAGGG
GTGACGATGC TCGCGGCAGG TTTTCTCATC ATCGGCCTGT CGCTCATCCT CTACGGGGCC
GGCAATGGCA TCTTCTCGAT CGCCAAGGGT GCGCTCCCGC TCGCCCTGTT CGGACCTTCC
CGCTATGCGC CGATCATGGG GCGGCTTGCC CGGCCCAGTC TCGTCGCCCA AGCTGCCGGC
CCAACCGTGG GTGCGATCCT GCTTTCGGTC GGGGGCACCG ATCAAACTCT TGTGGCGCTG
GCAGCTCTCG CCATCGCCAA TCTCGCCCTC GTCGCGCTGT TATGGGGGCC GATCAAAGGA
GAAGCGGGAA GCAACGATAA GTTTTGA
 
Protein sequence
MTTNLPAQTG LSPDARRWPV ISALGIVQIF AWGSSYYLLA VLAAPIAADT GWPLSWIVGA 
LSIGLLAAGV VSPRVGDAIG QHGGRPILAL ACLLFAAGLV ILAAAPSLWV FVAGWIVLGI
GMGAGLYDAA FATLGGYYGR SARSAITTLT LWGGFASTVC WPLSALFLEH LGWRGACMAY
AGIHLAICLP LVLLVLPSNG KPRPIGGKDQ APAIKLRDHE RRAYLIMMAI VVLAGLGVTI
ISVHLLTLLQ QRGLSLGEAV ALGALIGPAQ VAGRIGEMAS GGRHHPFWTL AAASVLSAAG
VTMLAAGFLI IGLSLILYGA GNGIFSIAKG ALPLALFGPS RYAPIMGRLA RPSLVAQAAG
PTVGAILLSV GGTDQTLVAL AALAIANLAL VALLWGPIKG EAGSNDKF