| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2793 |
|---|
| Symbol | |
|---|
| ID | 5382814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | - |
|---|
| Start bp | 50856 |
|---|
| End bp | 55952 |
|---|
| Gene Length | 5097 bp |
|---|
| Protein Length | 1698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640835469 |
|---|
| Product | YD repeat-containing protein |
|---|
| Protein accession | YP_001371331 |
|---|
| Protein GI | 153010117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTC TAGCATCTCA GTTTTACACG AGGGCGACGA ATTTTGCTTC GGCGCTTTCG
GGTAACGTCG ACCCGCGCAT GGGGCAGTAT ACGATCAACC TGGCGATCGG CACATTGAAC
GCCAATGACT TGCTAGGTCC CAGTATTCCC CTAGGGCTGA GTTACTCGCC TCAGAATACG
GGCAATATGG GTTTCGGCAT TGGATTTTCG ATTGGCCTGT CCAGTTATGA CACGCAGCAG
ACACTGTTGT CGTTATCGAG TGGAGAACAA TATTATACGG ATACGAATCT TATTCTGAAG
CAAAACAGGC TTCAGGCAGT TTCGCTTCAG AATGACGGCA AAAACTACAA AGTCCTTTAC
AAGAACGGCA CGGTTGAGCT TCTTGACGGG CCGGGCACTG CCAATGCCGT CAAGGTGACG
CGAAAGATAT TCTCCCCTGA AGGCCGTTAT GTCTCCCTGA GCTGGAATTA CAGCCAGAAC
CCGCCGCGCT TGCAATCTAT TCAGGATGAA GCAGGAACAT CTCTGCTTTC GATCAAGTAT
CCTGATGCCA GCAGTCTCCA GACGGTCCTT TCTGTACGGC CGGGAACAAC AGAAGGATAC
AATGTCACTC TATCATTTGA TAATGGCTAT TTGCTCAATG CGAGTTGTGA CGCACTGGGT
GGGTCAGACA AGACCTTGGA GTGGGCAATA GATTATACCG GCTTCGGCTC CAAGTGGCCT
GGCCAATGGG CATACAAGCT GACAAGCCCC GGCGGTCTGA TTGAAACAGC CACTTATAGC
TCAGGTCACC GCTTTCCCAC GAATGCAACC TCTATGCAAA ATTTGAGGCT GCCTTATGTC
ACTCAGTTCA CGCGCCAGCC AGGTGGAGGG GCTCAACAGC CCGATTTGAC GCTTACCTAT
GATTATGATC CCGACAGCAC CGGCAACAAT TTCCTTGGTT TTGGTGCGCC GAATGTCTTT
TCCTGGGACG CATCACAGGA CACGCTTTTA AACTGTGCGA ACGAGTACAC GTATCAATCA
GCAGAAACAT TCACTGATGC CGATCAGGTG AAAGCGACTA TTACGCGAAC CTATAACCGC
TTTCACCAAA TGATTTCACA GGTGACGAAG AAAAAAGACT GCTCGGTCAC CAAATCCACG
ACGTATAACA CAACCGCGAA TACTCCAGTG ACTGGCCAGC CCGCCAATTA CCAGTTCCCT
ACGGCAAGCA CGACGACCTG GAGCCGCACC ACAACAGAAA ACGGCAAAAT TGTAACCCAG
TCGCGCCAGG AAACGGCCAG TTTCACCTAT GACGATTTCG GCAACATGGT GACACAAAGT
TCCACCAAGC AGGATGCGGC CCAAAACTCT GTTTCGTTGG GACAGATCAC TTACGCTTAT
TACGAGCCGT CTGGCGAAGA TCAAGATGAC AAAAATGGCC TCGGCTGCCC GGCCGATCCC
AATCCCTTCA ATATCACAAG CAACATTCCC CGTTTCATCA AAACACAAAC CACCACGCCG
GCGACCACAT CTTACAGCGA TGTTCAGAAC CACGTGGTGC AATATCGTTA TGAGAAGTAT
AATTTTCCCG CCCAGGCGAC AACAGCCGGC CTCGACAGCT ATGCCGTCCT CAAGGCTGAA
GAACGGCATT TCAGCGGCAA TCAGCTTCTG GCAAAAATAG AATATACGTA TGACAGCACC
AGCAGCGAAT TCGGACGGCT TTTGCAGACA GTTGAGACCC ATTATCCGCA AGGAGAGGCT
TCCGATAGTT ATGTGACCAC TGCGGTTATG AAAACGACGC CCTCTGACCC TACAATCACG
CGCACCACAA CCGTCACGAC ACACGACGGC ATCGGCACCA GTCAGAAGCA AACGGCTTCA
CGGTTTACAG GTCGTGTTAC GGAAATCGTC AACGCCCTCG GCGTTGTCTC GCAGGCAAGT
TATGACAAGC TTGGCCGCGT TGTAGCTGCT ACAACAGCCG TTGGAACGGA TTACGAAAAT
ACCCGTTCGT TCGACTATGT GATCGGCAAT AGTACTGCCC CGTATACAAT CACGGCGACC
GATGCATTCG GCAATAAAGG CCAGACCGTA ATGGATGGGC TGGGTGGCTT CCTTACCGGG
CAGGTAATGC TGAAGGGCGG TTCGGACTGG CAAGTCATGC AAACGCGCAG TTATGATGAT
GCCGGTCGCC TGACGAGCAC AACCAGCAAG GATTTTGATC TGCTTACCAG CACCACCTTC
TATGGCCAGA TTACAACAAG CACGAATTAT GATGACTGGG GCAATTCCGA TTGCACGACT
GCGTTGAATA TCCAGCATTT TGCCTCAATG GATCCCATTG CACTGACAAA AGCCAAGTAT
AGTGTGTATG AAGATAGTTT GTATGAAGAT ACTACGAACG ACGACAAGAA AACCAGCAAA
ACAGTTTCGA CGCAGGATGT CTCCCTATAC GCTACCCACA CCGCACTTTA TCCATCCGAT
GCTGCAAGTG GTGCATCAGC CTATAGCACC GTGACCCAGA AATATGACGG ATGGAACCGG
TTGCGCTCAA GCACGGACGA GCTCGGTCGG ACAACCACCT ACGATTACGA CGCTTTTGAT
CGGGTCATCA AAACGACATT ACCGCAGGCG GATGGAGAGA CGAGCGCGAC TGTGGTGACG
CGCGCATACA GTCCGGACTC TCCAGCGCAA ATTCTGATTG ATATCTGTGT GAATGGCGTT
TCGATGGGCA AGCGTGTTGT GGACGGGTTA GGGCGTTGTA CCAGCCAGAC CTCAGGCGGC
CGCAGCTTTA CAGCAGCCTA CGATAGTGAT TGCGGCAGCC TGACTGCGCC AGCCTCTGTC
ACCTCGCCTT ATGGCGTAAC CGTAGACTAT ATCTACCAAG CGGAATTGGG TGGCAAGCTT
GCCAGCAAAA AGATCGCGTC CAGTTCAGTA ACAGGTAACA CCGGTCCGGG CGCAGACAGC
AAAACCCTGA CCTACCAAAA ATGGACCGGA GCACTGGAAA CCGCCACGAG TACGAACGCG
CAAGGCAGCT CCAGTATTTC CAACACATTT GAGGCAACGG GCCGCCTTCA AAGTGAAACT
TTCTCTCAGG GTGGTTCTGC TGCTACCGCA TACGCCTACA CCACAGCAGG AAAGACAAAA
AGCTATACCG ATGTGACCGG CGTTACATGG AGTATCAAGA ATTGTGACCA CTATGGCCGC
CCGACACAAG TGGCTGACAC GGATGTCCAG CTTGACCTGT CTTATGATGT GCTGGGCCGC
CTCAATTGCT GGAAAGCGAC CGATCTTTCC ACCGGCAATA AACCAACCCT GACCACAACG
CTCGCTTGGG ACACGCTTGA TCGTGAAGAC ACCCGGACGG TCACCAGCAG CTCATCTGGA
AATAGCTGGT CCCTTACGTC CACCTATAAT GTCAACCATC AGCTTGCCGG CAAAACATTG
AAGCGCAATG GCAACTCAGT TCGCGTTGAA ACCTACACTT ACGACGCGCG CAATCGTCTC
ACTGAGTATG ACTGCAGCGG CACAGAGCCT GCCCAGGATT CCAAGGGACT GGCCATACAA
AAACAGACGT TCACTTATGA TCCATACGAC AACATCACGC AACTTTCCAC GACCTATCAG
GACAAGTCGT ACGATCAAAT GCTTTGCGCC TACGACGCTA CCGATCCGTG TCAACTGAAA
ACCGTCACCC ATATACAGAC GAGTTCTTTC GGCGTGACCA CAATGCCCGT TGTCACCACG
CTCATCTATG ATGAAGCCGG GTGTCTTGTG AACGATGGCG AGGGGCGTAT ATTTACTTAC
GATATCGGCA TCAATTGCGG CGCGCTCCTG TCTGTCACGA AAGCAGGCCA GACATCGAAC
CTGGCCCATG ACCCCCTGGG CCGCCTCATC GATGAAGATG GAACCAAACT GTTCTATCGG
GGCTCCACGC TCGTCAATCA AATCCAGGAT GCCAACAACG TGCGTTTCGT TGCCGGGCCG
GGCGGCAATC TTGCTCAGGT GCGCACGGGC AGCAATGCAG GTGTTTGGCT TTCAGGTGCT
GATGCCAGCG GATCCATCCT CAGCGTTGAC AGCAGCAATA CGTCCCACCC CCTGACCTAT
GGTCCGCATG GGGAGCAATC GACTGATGCC GACGATACCA GCCTGCTTGG TTACAATGGC
GAACGCAAAT CTGTGCTCCT CGACGGCTAT CATCTGGGCA ATGGATATCG GCTCTACAGC
CCCATATTGC GCCGCTTCAC AGCTCCCGAC AGTCTTAGTC CTTTCGGTCA AGGCGGCATC
AATCCCTATG CCTATTGTGC GGGCGATCCA ATCAACAACA CCGATCCAAC CGGGCATATC
CGTGTATTTA AAGCGATAAG GAAAGATGTA AGAAGAGTTG AAAGAGATGT AGTGGATGTC
GAGGATAAAG TATTAGGGCC CGTGGCGCCG GTGTTGAATG ACGCAGTTAG AGTTGGCGTT
CAAGCAGCTG AGGTGGCAGA TGGCGATGAG GAACCGCTGG TAAAAGATGC CGAGAAAGCC
GGTGACAGGG CTCTGAAGGA TGGCGCGGAA GATGCCGCAA AAGACGTCGA CAGCGATGAA
CCGCCTGCTA AAAAATCCAG ACCCGACGAG CCAAGTGGCG GTGCCCCGAG TGGCAGTGGC
AGCGGTGACG CTCCAAGCGG CAGTGGCGGC GGTGATGCCC CGAGTGGCAG TGGCGGTGGC
GATGCTCCCG GTGGCAGTGG CGGTGGCGAT GCCCCGGGTG GCAGTGGCGG TGGCGATGCC
CCGGGTGGCA GTGGCAGCGA TCATGTGCCT GAAAAGAATA TAAATCAATT GCACAATGAA
CGCCGCAAAC TTCTGAATCA GTATTCTGTT GCCAACAATG ATGTAGAGTC TCTGTCTAGA
GAACTAAACT ATCGCGCCAA TAATTTACGT CCCAGATTTA GGGATGGTAT GTCGCGGGAG
CAAATTCATG ATTTTCATGA AAGGTCCATA TTTAACTATA ACGATACTCA ATCTCGCCTA
ACAAATAGGA GAAATCTATT AAATAGAACC ACCAATAGCT TAATTGAAAA TACTAACCAG
ATCAATAGTC TCAAAACTGA CAAATTTTGC TTACCTCCCT TGCCATGGGA ACTGTAA
|
|---|
| Protein sequence | MTSLASQFYT RATNFASALS GNVDPRMGQY TINLAIGTLN ANDLLGPSIP LGLSYSPQNT
GNMGFGIGFS IGLSSYDTQQ TLLSLSSGEQ YYTDTNLILK QNRLQAVSLQ NDGKNYKVLY
KNGTVELLDG PGTANAVKVT RKIFSPEGRY VSLSWNYSQN PPRLQSIQDE AGTSLLSIKY
PDASSLQTVL SVRPGTTEGY NVTLSFDNGY LLNASCDALG GSDKTLEWAI DYTGFGSKWP
GQWAYKLTSP GGLIETATYS SGHRFPTNAT SMQNLRLPYV TQFTRQPGGG AQQPDLTLTY
DYDPDSTGNN FLGFGAPNVF SWDASQDTLL NCANEYTYQS AETFTDADQV KATITRTYNR
FHQMISQVTK KKDCSVTKST TYNTTANTPV TGQPANYQFP TASTTTWSRT TTENGKIVTQ
SRQETASFTY DDFGNMVTQS STKQDAAQNS VSLGQITYAY YEPSGEDQDD KNGLGCPADP
NPFNITSNIP RFIKTQTTTP ATTSYSDVQN HVVQYRYEKY NFPAQATTAG LDSYAVLKAE
ERHFSGNQLL AKIEYTYDST SSEFGRLLQT VETHYPQGEA SDSYVTTAVM KTTPSDPTIT
RTTTVTTHDG IGTSQKQTAS RFTGRVTEIV NALGVVSQAS YDKLGRVVAA TTAVGTDYEN
TRSFDYVIGN STAPYTITAT DAFGNKGQTV MDGLGGFLTG QVMLKGGSDW QVMQTRSYDD
AGRLTSTTSK DFDLLTSTTF YGQITTSTNY DDWGNSDCTT ALNIQHFASM DPIALTKAKY
SVYEDSLYED TTNDDKKTSK TVSTQDVSLY ATHTALYPSD AASGASAYST VTQKYDGWNR
LRSSTDELGR TTTYDYDAFD RVIKTTLPQA DGETSATVVT RAYSPDSPAQ ILIDICVNGV
SMGKRVVDGL GRCTSQTSGG RSFTAAYDSD CGSLTAPASV TSPYGVTVDY IYQAELGGKL
ASKKIASSSV TGNTGPGADS KTLTYQKWTG ALETATSTNA QGSSSISNTF EATGRLQSET
FSQGGSAATA YAYTTAGKTK SYTDVTGVTW SIKNCDHYGR PTQVADTDVQ LDLSYDVLGR
LNCWKATDLS TGNKPTLTTT LAWDTLDRED TRTVTSSSSG NSWSLTSTYN VNHQLAGKTL
KRNGNSVRVE TYTYDARNRL TEYDCSGTEP AQDSKGLAIQ KQTFTYDPYD NITQLSTTYQ
DKSYDQMLCA YDATDPCQLK TVTHIQTSSF GVTTMPVVTT LIYDEAGCLV NDGEGRIFTY
DIGINCGALL SVTKAGQTSN LAHDPLGRLI DEDGTKLFYR GSTLVNQIQD ANNVRFVAGP
GGNLAQVRTG SNAGVWLSGA DASGSILSVD SSNTSHPLTY GPHGEQSTDA DDTSLLGYNG
ERKSVLLDGY HLGNGYRLYS PILRRFTAPD SLSPFGQGGI NPYAYCAGDP INNTDPTGHI
RVFKAIRKDV RRVERDVVDV EDKVLGPVAP VLNDAVRVGV QAAEVADGDE EPLVKDAEKA
GDRALKDGAE DAAKDVDSDE PPAKKSRPDE PSGGAPSGSG SGDAPSGSGG GDAPSGSGGG
DAPGGSGGGD APGGSGGGDA PGGSGSDHVP EKNINQLHNE RRKLLNQYSV ANNDVESLSR
ELNYRANNLR PRFRDGMSRE QIHDFHERSI FNYNDTQSRL TNRRNLLNRT TNSLIENTNQ
INSLKTDKFC LPPLPWEL
|
|---|
| |