| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_2166 |
|---|
| Symbol | |
|---|
| ID | 5379547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 2275074 |
|---|
| End bp | 2276369 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640834837 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001370711 |
|---|
| Protein GI | 153009496 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.892226 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA CCGCGATCCC TCTGTTTCGC AAACAAGCCG TTGTTGCGCA GCGTGATGCA
TGGCTCGGTA ACCCACGATT GATCCAGCCG ATTTCAGTTC AGCTTGCTAC CGTGATCGGG
TTAACAATCA TATCGCTTAT CGTGGCTGTT CTGGTACTCG GCGAATACAC CCGCCGGGTC
CGGGTTCATG GCGCTGTCGT CCCAAGTGCG GGCGTTCTTC ATGTTTTTGC GCCGCAGGCG
GGACGCTTGC TGCAGGCCCA AGCCACTGAT GCTGCAACCG TTGAGGCTGG TGATCCGCTA
TTTCTCTTGG GAACCGACAC AACGACCAAT CTTGGCGAGA CGGAAAGCGT AGTCAAGGAC
CAGCTGCAGA GCCGCATTGA TGAGATCGCT GAGGCGATCA GGCAACGGGT ACGATTGGAT
GAAATTGAAA AGCGGGCATT GGCTGAACGC AGGGGTGCGG TGAAACTCGA GATCGAGCGT
GTCGACGCGC AGATAAAACA GACCGAGGAA TATATCGCTG TGCTTCAGCC CCGTGCCGAC
AAATATCGCA GGCTCGTTGA CAGCGGCATC ACCTTGGAGC GCAGCTTTGA GAGCGCCGAG
CAAAACTATA TGCAGAACAG ACAGGAGCTG GAAGCACTGC GTAGGCAACG GGTTCAACTT
GAAGGTACGG CTGTAGATTT AGGCTCACGA TTGGAGGGGT ACGATGCGTC GGCGGCTATC
GCCCTCGGTG AAATGCGTCA GCGGATTGCT ACGCTGAGAG AACAACTGGC GCAGGCAGAA
GCACGCCGGG CGATTGTTAT CGCGGCTCCT GCCAATGGTA CCATCGCAGC CGTGCTTGTT
CATTCTGGCC AATTGGTTGC GGCTGGTTTA CCTCTCGTGT CAATCCTGCC TACCGGTGAG
GCAATGGAAG TGCATCTGCT CGCTGACAGC AAGGCCATCG GTTTCATCCG TGAAGGAGCG
CGGGTTCTGT TGCGTTATAC GGCCTTTCCT TATCAAAAGT TCGGTCAATA TGGTGGCTCG
ATCACGAAAG TTTCTCGCGT AACCCTCCAG CCAACCGAAA CGAATGCGGA CGCGCTGGCG
GCGCAACCCC AACCAACACA GGCACAGTAC CGCATCACAG TCCAGCCCGA CCAACCGAAC
GTTATGGCCT ATGGAAAAGC CGAGCCTTTG AGGGCGGGTA TGGGTGTCGA GGCCGATCTC
CTGCTCGACA CCCGTCCGCT TTATCAATGG CTGCTCGAAC CGCTTTACAG TCTGCGGGGA
CGGGCCATTG ATCAGGCTGT CAAAAATCCC AAATGA
|
|---|
| Protein sequence | MNQTAIPLFR KQAVVAQRDA WLGNPRLIQP ISVQLATVIG LTIISLIVAV LVLGEYTRRV
RVHGAVVPSA GVLHVFAPQA GRLLQAQATD AATVEAGDPL FLLGTDTTTN LGETESVVKD
QLQSRIDEIA EAIRQRVRLD EIEKRALAER RGAVKLEIER VDAQIKQTEE YIAVLQPRAD
KYRRLVDSGI TLERSFESAE QNYMQNRQEL EALRRQRVQL EGTAVDLGSR LEGYDASAAI
ALGEMRQRIA TLREQLAQAE ARRAIVIAAP ANGTIAAVLV HSGQLVAAGL PLVSILPTGE
AMEVHLLADS KAIGFIREGA RVLLRYTAFP YQKFGQYGGS ITKVSRVTLQ PTETNADALA
AQPQPTQAQY RITVQPDQPN VMAYGKAEPL RAGMGVEADL LLDTRPLYQW LLEPLYSLRG
RAIDQAVKNP K
|
|---|
| |