Gene Oant_1923 details

Gene Information

• Locus tag: Oant_1923
• ID: 5379058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 2027707
• End bp: 2028288
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640834588
• Product: cold-shock DNA-binding domain-containing protein
• Protein accession: YP_001370468
• Protein GI: 153009253
• COG category: [K] Transcription
• COG ID: [COG1278] Cold shock proteins

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.384724
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACA AGTCTGTGTC TAATGACCAG TTTCACAGCC AGCACGCCTC GGAAGAGCTG 
GGCGATATCA TCGAAGTCTC GGGCCATATC AAATGGTTCG ACGTAGCCAA GGGCTACGGC 
TTCATTGTTC CAGACCAGCC GGGCCTTAAT GACATTCTTC TCCATGTGAC GTCACTGCGT 
CGCGACGGCT TCCAGACTGC TCTGGAAGGT GCGCGCATCG TTTGTGAAGT TCGCAATGGC 
GATCGCGGCC TGCAATGTTT CCGCGTCCTG TCGATGGATA CGTCTACTGC CGTTCACCCG 
GCGCAGATGC CGCCGCAGCG AACTCATGTG ACTGTTACGC CGTCGAGCGG CCTTGAGCGC 
GTGATCGTCA AGTGGTTCAA TCGCACCAAG GGCTTCGGCT TCCTGACGCG CGGCGAGGGG 
ACGGAAGATA TTTTCATCCA TATGGAAACG CTGCGTCGTT TCGGCATGAT GGAGTTGCGC 
CCCGGTCAGG TCGTGCTTAT TCGCTTCGGC GAAGGCGACA AGGGCCTGAT GGCGGCGGAA 
ATCCATCCGG ATATCGGCAC GGCAATCCCG GTTTCGCATT AG 

 

Protein sequence

MADKSVSNDQ FHSQHASEEL GDIIEVSGHI KWFDVAKGYG FIVPDQPGLN DILLHVTSLR 
RDGFQTALEG ARIVCEVRNG DRGLQCFRVL SMDTSTAVHP AQMPPQRTHV TVTPSSGLER 
VIVKWFNRTK GFGFLTRGEG TEDIFIHMET LRRFGMMELR PGQVVLIRFG EGDKGLMAAE 
IHPDIGTAIP VSH