Gene Oant_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1552 
Symbol 
ID5380049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand+ 
Start bp1631591 
End bp1632232 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID640834210 
Productexonuclease RNase T and DNA polymerase III 
Protein accessionYP_001370097 
Protein GI153008882 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0259008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCGC AGGCAAAATA TTTGACGTTC GACACTGAAA CGAACGGCCT TTTCAACTTC 
AAGCTTCCGG CGGACGCCGA AGGTCAGCCG CGCCTTGCGC ACCTTGCTAT GATTTGGGCC 
GACGAAGACG GCAACGAAAT CAAGCGCAAG GATTATTATA TCCGGCCCGA TGGCTGGACC 
ATGCCGCAGG GGCCGGGATC AGCAGGCGCG GTCAATGGTT TGACTGACGA ATTCCTTATG 
GAAAACGGCG GTCATATCGA TGCGGTTCTT CACGCCTACA CTCGTGAAAT TGAGCGCGGC 
TTGATCGCGG TAGCCTTCAA CGCACAATAC GACCTCAAGA TCATGCGCGG CGAATTGCGC 
CGCGCCGGTA TGCCTGACCT CTTCGAAAAG ACGCTGAATA TTTGCGTCAT GCGTCCGATG 
ACCGGCCTTT GCCAACTGCC TAAGCGGAAC GGTTTTGGCT TCAAGTTTCC GAAGCTCTCC 
GAAGCCCTGG AATATTTCGG ACATTCGCTG GAAGGCGCTC ACCAAGCGAT CAATGACGCC 
GAAGGCGCTC TTATCGTCAT GCGGGAATTG ATGCGTATCG GTCGCCTACC CGAACCGGCG 
GTTCACTACG CGAAGAACCG GCCCGACGAA GCCGCCGCTT AA
 
Protein sequence
MEPQAKYLTF DTETNGLFNF KLPADAEGQP RLAHLAMIWA DEDGNEIKRK DYYIRPDGWT 
MPQGPGSAGA VNGLTDEFLM ENGGHIDAVL HAYTREIERG LIAVAFNAQY DLKIMRGELR 
RAGMPDLFEK TLNICVMRPM TGLCQLPKRN GFGFKFPKLS EALEYFGHSL EGAHQAINDA 
EGALIVMREL MRIGRLPEPA VHYAKNRPDE AAA