| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1505 |
|---|
| Symbol | |
|---|
| ID | 5379138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 1596671 |
|---|
| End bp | 1598221 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640834164 |
|---|
| Product | lambda family phage portal protein |
|---|
| Protein accession | YP_001370051 |
|---|
| Protein GI | 153008836 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5511] Bacteriophage capsid protein |
|---|
| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC TAAATTTTCT GGATCGGGCA ATCGGATGGG TTGCCCCCGG CGCTGCCGCG
CGCCGTGTTC GTCAGCGTGC CGTCCTTGAA GTCCTTTCAC GGGGCTACGA TGGTGCGACA
AGCTCGCGAC TGAATGGGAA TTGGCGGTCG TCTGGTACGT CCGCCGATGC CGAAATCGGA
AGTGCTGGCG CTCGCCTTCG CAATCGAATG CGTGAGCTAG TCCGAAATAA CCCGCACGCT
GCGAATGCAG TAACGCAGCT TGTGACGCAT ATTGTCGGCG ACGGCATCAT GCCACGCGCC
AAAACGGGCG ACGACGCAAA AGACAAGAAG GTCAATGACC TTTTTGACGA ATGGTCGAAG
AAAGCCGACG CGGACGGCGG GCTTGATTTC TATGGGCTTC AAACGCTCGC TATTCGCGGG
ATGATTGAGA GTGGCGACGG TATTATTCGT CGCCGCCGCC GGACGCGCAA AGATAAATTG
CCGGTTCCCT TGCAATTGCA AGTCCTTGAA ACCGACATGA TCGATAGCGC GAAGGAAGGA
CCGCTTTCCG CTGGTAATAT CGCTGTTCAA GGTATCGAAT TCGATGCCGA AGGAAGGCGA
GCCAACTATT GGCTTTTCCA ATCGCACCCC GGAAACACTT ACCTTGATCC TCGCTCCGCA
CTGATTTCCA AGCCTGTTGC GGCCAAAGAT ATCGCCCATG TGTTCGAAAA GCAGCGAACA
CAGGTGCGCG GCGTCCCGTG GGGATCGCCC GTCATGTCGC CTATCCACGA TCTAGGCGAA
TATGAAGGCG CTGAAATCGT CCGCAAAAAG ATTGAAAGCT GCATGGTCGG TATCCTCGTT
CGCAAGAATG AGGATGAAGG CTTAGGCATT CCGGTTAAGG CTGACGATGT TGTGCGCAAG
CCCGGCGTCT ACGACGGCTC TGGTTATCCG GTCGAGCGCT TTGAACCCGG TATGTTTGCG
TTCGCAGAAG GCGCGGACGA TATCAAGTTC AACACGCCCG CCGCGAATAG CCAATATGAG
GCATACAAGC GGGCCATGCT GCACACTATC GCGGCTGGCT TCCGTATTCC TTATTTCCTA
CTGACCGGCG ATCTTTCGCA GGCAAGTTAC GCTTCTTCAA AGATCGGCAT CGAACCATTT
GCCCGGCTTG TTTCAGCCGT TCAGTGGCAA ATGGTTATTC CGATGCTCTG CGAACCAATA
TGGGATTGGT TCTGCGAAGC GGCCTACTCT GACGGCAAGA TCGATACGCC TTACGTTCCT
GTAGAATGGA CCCCGCCGAA ATTCTATTCG GCTGATCCTA AGAAGGATGC GGAAGCAATT
ATCGCAGAGG TTCGCGCCGG GCTTCGGTCA ATGCCTGATG CCATTTCCTC GACCGGACGC
AATCCAGACG TTGTGTTGAA AGAAACCATC GGCTGGAACG CGAAGCTTGA TGCGGGCAAG
GTCATTCTGG ACACCGATCC GCGTAACGTC ACCAAACAGG GTATGTTCCA AATGGAACCC
GATCCGCCCG GCGACGGCGG CGGCGTCCCT TCTCAAAACT CAAAGGACTG A
|
|---|
| Protein sequence | MTKLNFLDRA IGWVAPGAAA RRVRQRAVLE VLSRGYDGAT SSRLNGNWRS SGTSADAEIG
SAGARLRNRM RELVRNNPHA ANAVTQLVTH IVGDGIMPRA KTGDDAKDKK VNDLFDEWSK
KADADGGLDF YGLQTLAIRG MIESGDGIIR RRRRTRKDKL PVPLQLQVLE TDMIDSAKEG
PLSAGNIAVQ GIEFDAEGRR ANYWLFQSHP GNTYLDPRSA LISKPVAAKD IAHVFEKQRT
QVRGVPWGSP VMSPIHDLGE YEGAEIVRKK IESCMVGILV RKNEDEGLGI PVKADDVVRK
PGVYDGSGYP VERFEPGMFA FAEGADDIKF NTPAANSQYE AYKRAMLHTI AAGFRIPYFL
LTGDLSQASY ASSKIGIEPF ARLVSAVQWQ MVIPMLCEPI WDWFCEAAYS DGKIDTPYVP
VEWTPPKFYS ADPKKDAEAI IAEVRAGLRS MPDAISSTGR NPDVVLKETI GWNAKLDAGK
VILDTDPRNV TKQGMFQMEP DPPGDGGGVP SQNSKD
|
|---|
| |