| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0881 |
|---|
| Symbol | |
|---|
| ID | 5380204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 916851 |
|---|
| End bp | 918674 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640833526 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001369432 |
|---|
| Protein GI | 153008217 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.435761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTCAAA GAGTTTTTAA GTATTTTGAA CAGTTAGTTG ATTTTCACCA TCACGGTCTG
CGGGCGCATC AGTCGCGTAC TGCGCTCGCA CTTTTCTTTG TTCTCATAAA ACCGTTTCGG
TGGCTGATTG TGGCATCTGC GCTGTCTGGT GCTGCCCTTA CGGCGATTGA CCTGCTTAGA
ATGTGGGCTG TGGCGTATAT CGTTGATATG GTCGCGCATT CGCCCGAGCT CAATTTAACT
TCTGCAACGA TCACCTTTTT TGGCTCGTTG ATTGTCGCTT ATGCGGTAGC TGATCCTGCA
CTCTGGCTCG TCAATTACAT GCTTCGAATG CAGGCGCTTC GATCACAGAC AAAATCATCT
GCCCTTTGGC AGTCGCACAA GGCTGCTTCT CAACATGGTA TGGAATATTT CCATTCGCAC
CACGCCGGCC AGATTTCCGG GCGTATAGGG CAACTCTCGA ATGCAGTGCA ATCGGGTATA
GAAATTCTAG CTGGTCGTTT CCCACTCGGC TTTGTGCGTT TCGCAGGTTC TGCCGTTCTT
ATTTCCTATC TTGCTCCTCT ATTTGTCGTT CCAGTGTTGA TTTGGATTTT ACTAAATGGA
TTGTTAGCGA TCTATCTTGT GCCAAAGTTC AATGCTCAAG CTGAAAAAAT TTCCGAGACG
TCCAGCATCG TAAACGGCGC TATTACAGAA TATTTTTCAA ATATTCGTGC GATAAAGACC
TTATTTGCTT ATGATACAGA GAACAGTTTT GTTCTTTCAA GAATTGATAA GCAACACAAA
ACAAACCTCG ATATTAACCG TTTAACAACG ATTGCCGGGC TGTTCATTCG TGTGCTGAAC
ACAGGTCTGG TTTCCAGTAT TCTCGCATTG GGCTTATACG GATTAGCACA GGGATTGATA
TCGCCTGGTG AGTTTGTTGC AGGAATTACC TTAGCCGGGG GCATGGCTGC GGATGCTGGT
TGGTTTGTAG GGGTGTGGGA AGGACTAACT CAGACATTTG GCACTATCAG AGATGCGCGT
TCGACTGTTA CGGCAAAACC AATCGTTAAA GACGGCAGTG AGCGCCTACG GGTGTCCAAT
CCACCACACA TTTCATTGCA TAACGTCAGT TTCTCTTATG GAATAAAACA AACTTTGAGG
AATATCTCGT TTGAGATAGA GGCTGGGCAG AAGGTTGGTA TCGTTGGGCC CTCTGGAGCA
GGTAAATCTA CGCTTATCGA TCTAGTGCTG AGACTATACG ATGTTGATGC AGGACAGATT
GCGCTTGATG GGCAGGATAT TCGCTCTGTG AAGATTTCCG AGCTACGAGG CGTCTTTTCA
GTCGTTGCGC AAAGCGACGC GCTGTTTCAT CGGTCGATAA AAGAAAACAT CGCGTTTGGC
GCGGAAATCT CCAACAATGC AGCGATAAAG CGTGCAGCCG AGTTAGCAGA TGCATCTTCG
TTTATTGAAG AGCTAGCCCC GGACGGGAAG GGCTTTGACG TAGTCGTTGG AGAGAGGGGA
GCGAGACTTT CGGGTGGTCA ACAACAACGC ATTTTACTCG CACGCGCCTT CCTACAAAAT
CGGCCCGTTC TTATTCTTGA CGAAGCCACC TCCGCTCTCG ATACCAATAG TGAAAGCTTG
ATTAAGAATG CAATTGCGTC GCTTGACGCA GATACAACTG TTATCGCAGT TGCGCATCGC
CTTTCTACCG TCAGAGACTT TGATAAAATC ATCGTTCTAG ACAATGGTGC TGTCGTGGCA
ATGGGACCAC ACGAAGATCT TATTCAATCC TGTGAGCTTT ATCGAGAGTT GTGGATTAAG
CAGGCTGGCC TGACGACGAT GTAG
|
|---|
| Protein sequence | MLQRVFKYFE QLVDFHHHGL RAHQSRTALA LFFVLIKPFR WLIVASALSG AALTAIDLLR
MWAVAYIVDM VAHSPELNLT SATITFFGSL IVAYAVADPA LWLVNYMLRM QALRSQTKSS
ALWQSHKAAS QHGMEYFHSH HAGQISGRIG QLSNAVQSGI EILAGRFPLG FVRFAGSAVL
ISYLAPLFVV PVLIWILLNG LLAIYLVPKF NAQAEKISET SSIVNGAITE YFSNIRAIKT
LFAYDTENSF VLSRIDKQHK TNLDINRLTT IAGLFIRVLN TGLVSSILAL GLYGLAQGLI
SPGEFVAGIT LAGGMAADAG WFVGVWEGLT QTFGTIRDAR STVTAKPIVK DGSERLRVSN
PPHISLHNVS FSYGIKQTLR NISFEIEAGQ KVGIVGPSGA GKSTLIDLVL RLYDVDAGQI
ALDGQDIRSV KISELRGVFS VVAQSDALFH RSIKENIAFG AEISNNAAIK RAAELADASS
FIEELAPDGK GFDVVVGERG ARLSGGQQQR ILLARAFLQN RPVLILDEAT SALDTNSESL
IKNAIASLDA DTTVIAVAHR LSTVRDFDKI IVLDNGAVVA MGPHEDLIQS CELYRELWIK
QAGLTTM
|
|---|
| |