Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0687 |
Symbol | |
ID | 5380906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 714826 |
End bp | 715656 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640833334 |
Product | polysaccharide deacetylase |
Protein accession | YP_001369241 |
Protein GI | 153008026 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.029729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTCGTT TTATTGCTTC GGCAGGAGCC GTCATTCTCG CCACGACTGG CATTGCCAGC GCATACGATA TCTCGCCGCA GGAGCGCGCG GAGAATAAGG CTGCGCACGA CACGATCAAG ATCGTTGAGC CGCAATTGCA TATCGCGCGG GGTGGTGCTG CATCGCCCCA GGTGGCACTG ACGCTTGATG CCTGTATGGG CAAGACCGAT CATCGCATTC TGGACATGCT GGTGCAGAAC CGTATTCCAG CGACGATCTT CGTGACGGGG CGATGGATAA AGCAGAACCC GGCCGCCATG GCGGTTTTGA AGGCCAATTC CGATCTGTTC GATATCGAGA ACCATGGCGC AATGCATGTT CCGGCCATTA CCAACGAGCC GAAAATGTAT GGCATCAAGA CAGCAGGATC ACTTGAGGCG GTTTATCTGG AAATCGATGC CGGCGCGACG GCGATTACTG ATGCCGGAGT GTCGAAGCCT GTCTGGTATC GCGATGCGAC TGCCCGTTAT TCGACCGATG CCATCAAGCT GGCAACAAGC ATGGGCTACA AGATCGGTGG CTATTCGCTG AATGGCGATC AGGGCGCCTC GTTGCTGGCG CCGACGGTTG AGCGCCGCAT CGCTGCTGCG CGTGACGGCG ACGTCATCAT CTCGCATATC AACCAACCAA CGCGGTCGGC GGGTGAAGGG GTGGCCAAAG GCGTTCTGGC CTTGAAAGCG AAGGGGATGA AATTCGTGCG ACTCAAGGAT GTCGAGACGA TGATGACACT CAACCCGGTT GCTCCGCACA ATCTTCATGC GGGCGTTCCA AAGCCTGTAG CGCCGAAATA A
|
Protein sequence | MLRFIASAGA VILATTGIAS AYDISPQERA ENKAAHDTIK IVEPQLHIAR GGAASPQVAL TLDACMGKTD HRILDMLVQN RIPATIFVTG RWIKQNPAAM AVLKANSDLF DIENHGAMHV PAITNEPKMY GIKTAGSLEA VYLEIDAGAT AITDAGVSKP VWYRDATARY STDAIKLATS MGYKIGGYSL NGDQGASLLA PTVERRIAAA RDGDVIISHI NQPTRSAGEG VAKGVLALKA KGMKFVRLKD VETMMTLNPV APHNLHAGVP KPVAPK
|
| |