| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0543 |
|---|
| Symbol | |
|---|
| ID | 5379480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 571883 |
|---|
| End bp | 572401 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640833196 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_001369103 |
|---|
| Protein GI | 153007888 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0586] Uncharacterized membrane-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.582875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTC TGGAACCATA TATTGCAGCC TATGGCGCGC TCGCGCTTTT CGTAATCGTA
TATTTCGAAT CTTTCGGTGC ACCATTGCCC GGTGAGAGCG CCCTTATAGC AAGCTCGCTG
CTTGCCTTGC ATGGAACGCT CAATATCGAA GCCGTACTGA TTGCCGTATT CATCGGCGCC
GTACTTGGCG ATTGCACCGG ATACCTGATC GGCCGTTTCG GTGGCCGCCG CCTGATCCTG
CGATACGGGC ACCTCGTCAA GCTGACGCCT GAACGGCTGG AACAGTTCGA GAAACTTTTC
GACAGCAAGG GAATTTACGT GGTCGCGACG GCTCGTTTCG TCGTGCTCCT GCGACAGCTC
AACGGCATCG TTGCGGGTTC GATGAAAATG AACCCGCTGC ATTTTCTGGC GGCCAATATC
GTCGCAGCTG CAGGATGGAC ACTGGTCTGG GGCCTAGGTC CCTACATGCT GAGCGGGATT
CTCGCGCCTT ATGTCACCCA GCTCAAAACG CTGTTCTGA
|
|---|
| Protein sequence | MSFLEPYIAA YGALALFVIV YFESFGAPLP GESALIASSL LALHGTLNIE AVLIAVFIGA
VLGDCTGYLI GRFGGRRLIL RYGHLVKLTP ERLEQFEKLF DSKGIYVVAT ARFVVLLRQL
NGIVAGSMKM NPLHFLAANI VAAAGWTLVW GLGPYMLSGI LAPYVTQLKT LF
|
|---|
| |