Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0170 |
Symbol | |
ID | 5380788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 190992 |
End bp | 192533 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640832819 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001368730 |
Protein GI | 153007515 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTGT CGCCCAAGCT CGATTTCCGT CAATCGCAAT CGCTGGTGAT GACCCCCCAG CTGATGCAGT CGATCAAGCT GCTGCAGATG ACGCATATGG AGCTGGAGCA ATTTCTCGAC ATTGAAATCG AAAAAAATCC GCTGCTGGAT CGAATTGAGG CAGCGAATGA TGATTTTTCG GGCGCTGAAT CAGCACGAGA CGGCGCTGAA ACCGGCGGAG AGGATGCGGC GTCGGATGAC TTGTCGGATG GCGACTGGTT CAAAACAGGC GCTTCGGATA ATGCCGAAAA TCTCTCATCC ACCTTCGACA GCTCACTTGA AAATATCTTT CCGGATGATC CGGGTCGCTT CGACGAGATC GGTCCCGATC TTGCCGCGCA ATGGAAATCG TCCGTCGGTG ACGGATATGT TTCAGGTGGC AGTTACGACA TCGATCAGGT TACGGCCAGC CGGATTTCAT TGAGCGAGCA CGTGGCGGAA CAGATCACGC TGACTTTTTC CAAAGCGGCA GACCGGTTCA TTGCGACGGC GCTCGCCGAT GCACTGGACG AGAGCGGCTA TCTGCGTGTC GATATTGTCG GTCTGGCCCA GAATCTTGGC GTGGAAACCG TCGAGATCGA GCACGTTCTT GGAGTGATGC AAGACTTTGA TCCGGCAGGC CTTTTTGCCC GTGATCTGCG GGAGTGTCTG GCGATACAGT TGCGTCTCAA GGATCGGTTC GATCCGGCCA TGGAGGTGTT GATCGACAAT CTCGATCTTC TTGCACGGCG GGATTTCGCG ACGCTCAAGA AGCTGTGCGG TGTCGATCAG GCCGATATTC TCGATATGCT GACCGAAATC CGTATGCTCG ATCCAAAGCC CGGTGCTTTG TTCGAAATCT CCGTGGCCGA TGCCATTGTG CCGGACGCAC TGGTTACACC GTCGCGTGAC GGTGGCTGGA CTATTGAACT CAACGCAGCC GCAATGCCAC GTCTTATCGT CAACAATGAA TATTATGCAG AGGTGAGCAC CTCGGTCAAA GCCGAAGAAA AAGCATTTCT CTCGGATTGC ATGCAGACTG CGAACTGGCT CGTACGCAGT CTCGACCAGC GCGCGCGCAC CATTCTCAAG GTAACGCAGG AAATCGTCCG GCAGCAGGAC GGCTTTCTGC GCCACGGCGT GACCCACTTG AAGCCGCTCA ACCTGCGCAC GGTTGCCGAC GCGGTCGGTA TGCATGAATC GACCATCAGC CGCGTGACGG CGAACAAATT CATGGCCACG CCGCGTGGCG TGTTTGAACT GCGCTATTTC TTTACGGCCT CCATTGCCTC ATCCGAAGGC GGCGACGCTC ATTCGTCGGA GAGCGTGCGC CATCGTATTC GGCAGATGAT CGACGCCGAA AAGTCCGACG ACGTACTGTC TGATGATGCC ATCGTGGATG CTCTGAAGAA GGACGGTGTG GATATCGCGC GAAGAACGGT CGCAAAATAT CGGGAATCGA TGAATATTGC TTCATCGGTT CAGCGCAGGC GTGAAAAGAA GGCAAGATTG TCAGCTTCCT GA
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Protein sequence | MALSPKLDFR QSQSLVMTPQ LMQSIKLLQM THMELEQFLD IEIEKNPLLD RIEAANDDFS GAESARDGAE TGGEDAASDD LSDGDWFKTG ASDNAENLSS TFDSSLENIF PDDPGRFDEI GPDLAAQWKS SVGDGYVSGG SYDIDQVTAS RISLSEHVAE QITLTFSKAA DRFIATALAD ALDESGYLRV DIVGLAQNLG VETVEIEHVL GVMQDFDPAG LFARDLRECL AIQLRLKDRF DPAMEVLIDN LDLLARRDFA TLKKLCGVDQ ADILDMLTEI RMLDPKPGAL FEISVADAIV PDALVTPSRD GGWTIELNAA AMPRLIVNNE YYAEVSTSVK AEEKAFLSDC MQTANWLVRS LDQRARTILK VTQEIVRQQD GFLRHGVTHL KPLNLRTVAD AVGMHESTIS RVTANKFMAT PRGVFELRYF FTASIASSEG GDAHSSESVR HRIRQMIDAE KSDDVLSDDA IVDALKKDGV DIARRTVAKY RESMNIASSV QRRREKKARL SAS
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