Gene Shew185_4319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4319 
Symbol 
ID5370396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5153087 
End bp5153797 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID640832582 
ProductABC transporter related 
Protein accessionYP_001368496 
Protein GI153002815 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGG TCAAACTGAT CGCCCGTGAC TTAGAAATGT CCTTCGGCGC GCGCCTGTTA 
TTCAAAGCCG ACGCATTATC GCTCTGCCAA GGGGATGTGA TTTATCTGCA AGGCGACAAC
GGCACAGGTA AATCGACCTT GATGAAAATT CTTGCGGGCT TGATGGCGCC AACTAAAGGT
AAAATTGAGA CTGTGGGTTT TGCCCAAAAT GCTTGGTGGC GACGCAATCC ATTATTAGGT
AAAGCAGTTT ATTTGCACCA ACATCCTTAT TTGTTCGACG GCACAGTGGA ATATAATCTC
ACCTATGGGC TGAATTTCAG TTCAGAAACA AAAGCCAAGG CGAAACAACG TATTACCCAA
GCGATTGAGA TGGCACAACT AGGATCGCTG CTACACGCCA GAGCCAGTAA TCTCTCTGGC
GGCGAAAGAC AGCGGCTCGC CATTGCGCGC GCTTGGATCC TACAACCTAA ACTGTTAATG
CTCGACGAAC CGACCTCCAA TATGGACAAG GATTCCCAAG AGCTAGTATT AAAAATGATC
CAACAACTCA AACACGAAGG CACAGGTATG TTGTTGAGTA GTCATCAGAA TTGCGCGTTA
ACCTCTATCT GCGAACAGCA ATGGCACATA GAAGGCGAAC GAGTGACGAC CGCTTATCAA
CACCCAGAAT CTTTGCCAGC ACAGGAGTCT TTATATGTCA TCGCAAATTG A
 
Protein sequence
MTKVKLIARD LEMSFGARLL FKADALSLCQ GDVIYLQGDN GTGKSTLMKI LAGLMAPTKG 
KIETVGFAQN AWWRRNPLLG KAVYLHQHPY LFDGTVEYNL TYGLNFSSET KAKAKQRITQ
AIEMAQLGSL LHARASNLSG GERQRLAIAR AWILQPKLLM LDEPTSNMDK DSQELVLKMI
QQLKHEGTGM LLSSHQNCAL TSICEQQWHI EGERVTTAYQ HPESLPAQES LYVIAN