Gene Shew185_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4237 
Symbol 
ID5372845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5051650 
End bp5052576 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID640832502 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001368416 
Protein GI153002735 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTGA AAGCCGTTTT ACTCTCATTG GCGCTACTTG CTATACCACT CACCGGTTGG 
GCGCAGGAAA ATGCCAGCGC CGATAACAGC CAAGCCACGT TACCGCTCAG CACTGAGACT
CATGCCATTG AGCAATTGTC TTCAGTACCT GAAACGGTAG TTTCGGGTGT GCAACAGCCA
ACGGAGGAAG CTTCCGCTAC AGATGTGTTA GCAACATCGA CTTGGTGGAA CGATGCCCTC
GCGCTGCTGG AGACGGGTGG CACAGTAGTG GTGATATTGC TGCTGATGTC ATTGGTTGCG
ATGACGATTG TGCTGATGAA ACTTATCCAG TTTCAACGAG TCGGACTGTG GCAACGTAAA
CCCGCAAGGC AGGCATTAGC GCTATGGCAA CAAGGCAAGC AGGAAGAAGC ATTACAGCTT
GCTGCAGTAA GCCGCAATCC CACAGCACAG GCAATGGCAC AAGCAATTCG TGGCATCACA
CGCCAACTGC CTGAACCTTT GGTGCGTGAA GAAGTGCTGC GTTATGGCTG TAATGCGCTA
TTTCAGTTAA GACGCGGATT GCGCCCACTA GAGGTCATAG GTTCATTGTC ACCGCTACTG
GGATTACTGG GCACGGTAAT GGGTATGATC GCCGCCTTCC AACAACTCCA AGCGGCGGGT
AATAAAGTGA ATCCGGCGAT TCTATCGGGC GGAATCTGGG AAGCCTTGCT AACCACAGCG
GTCGGCTTGT GTGTCGCAAT CCCAGTGGTG GCATTGCTGA ACTATCTGGA GCGCCGCGTC
GATCACCTCG CACATGAAAT GGATAACTTA GTGACGCAAC TGTTTACCCC AGAGTTATCA
GCGGCCAGCA CTTATCAAGC ACCAAACACA GTGGTTACAC CACTCACAGC CAGTAACAAA
CAGGCACGCC ATGCAAGCGC CCTTTAG
 
Protein sequence
MILKAVLLSL ALLAIPLTGW AQENASADNS QATLPLSTET HAIEQLSSVP ETVVSGVQQP 
TEEASATDVL ATSTWWNDAL ALLETGGTVV VILLLMSLVA MTIVLMKLIQ FQRVGLWQRK
PARQALALWQ QGKQEEALQL AAVSRNPTAQ AMAQAIRGIT RQLPEPLVRE EVLRYGCNAL
FQLRRGLRPL EVIGSLSPLL GLLGTVMGMI AAFQQLQAAG NKVNPAILSG GIWEALLTTA
VGLCVAIPVV ALLNYLERRV DHLAHEMDNL VTQLFTPELS AASTYQAPNT VVTPLTASNK
QARHASAL