| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3868 |
|---|
| Symbol | |
|---|
| ID | 5372324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4592110 |
|---|
| End bp | 4592985 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640832129 |
|---|
| Product | copper ABC transporter, permease protein |
|---|
| Protein accession | YP_001368055 |
|---|
| Protein GI | 153002374 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT CAGAGGTTTT GCAGTGTGGT CATTTAAGTG CTCTAAATAT AGTGAGTACC
ATAGCTGCCA AGGAGTTTAA GGACAATTTG CGCAATCGAT GGCTATGGAT GATGGCGGGT
GTATTGTTGC TGCTCTCCCT TAGTGTGAGT TTTATGGGGA GCGTAATATC GGGCAGCTTA
GTAGTATTTG AGCCTGCGCA GATCCTTTCT GGGCTTGTGA CTTTATCGGT ATTTATGCTG
CCATTAGGCG CGATTTTGTT GAGCTATGAC AGCTTTGTCG GTGAGAAAGA ATCTGGCACC
TTATTGTTAT TACTGACCTA TCCATTGGAG CGTTGGCATC TTGTCTGCGG CAAGTTTTTG
GGCCATGCGT GCGTAATGAC TATCGCCAGT ATCTTAGGTT TTGGTGTGAC AGGAGTATTA
CTGCTACTCG TTGGCGATGC TCAGGCTCAA CTCGCGATAA TTATCGGATT TACCCATTTG
ATAATAAGCA GTATTTTGTT GTCATTAGTG TTTGTTCTAT TGGGCTATTG GGTTAGCCTG
TGTGTGCGAG AAAAAGCCAA GGCACTGGGA ACGTTACTTA TTTTATGGTT TGTGCTTGTG
CTGGTTTATG ACCTTATTTT GCTCAGTGTT TTGGTTGGAA TGAGTGAAAT GCTTAATCGC
AATCTATTTA ATCTACTCAT TTTACTGAAT CCTACTGACT TGTTCCGTGC CTTAAATTTG
CTTGCCGCAC CTTCGGATAC ACTAGCCGCT AAAAGTAGCC TTTCCTTAAT CGCGCAAACG
GGATTGGGAT TACCCATGAT GTATGGTTTG TTAGGCGGCT GGATTATTGT TCTATTATTG
GGGTGCTCTA GGGTCTTCAA ACGTCAAGAA ATTTAG
|
|---|
| Protein sequence | MSQSEVLQCG HLSALNIVST IAAKEFKDNL RNRWLWMMAG VLLLLSLSVS FMGSVISGSL
VVFEPAQILS GLVTLSVFML PLGAILLSYD SFVGEKESGT LLLLLTYPLE RWHLVCGKFL
GHACVMTIAS ILGFGVTGVL LLLVGDAQAQ LAIIIGFTHL IISSILLSLV FVLLGYWVSL
CVREKAKALG TLLILWFVLV LVYDLILLSV LVGMSEMLNR NLFNLLILLN PTDLFRALNL
LAAPSDTLAA KSSLSLIAQT GLGLPMMYGL LGGWIIVLLL GCSRVFKRQE I
|
|---|
| |