Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3808 |
Symbol | |
ID | 5372491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4527505 |
End bp | 4528407 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832069 |
Product | GumN family protein |
Protein accession | YP_001367995 |
Protein GI | 153002314 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00133222 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA GCCAATGGCG ATTAATTGCA TCAATCTGTT TTCTGGCGTT GACGGGTTGG AGCACCAAAG CTGTGAGTGC CGAAACCGAT AAGCCGCCAT TTTATCAAGT GCAATGGCAA GGAAAGAGCG CGTATCTACT GGGTTCGATT CATATTGGAC GTGCCGATTT TTATCCTTTA CCCACCCCAA TTGAAACCGC GCTTGGCAAA GCGAAGGGCT TAGTCGTGGA AGTCGATATG AATAAAGCCG ATAGCAATGC CTTGCTGCGC CAATACGGCC GCGCCGATAA AACCAAAGGT TTAGATTGGC AGAGCCGAGA TAAACAAACG GTTGAGAGCA TGACGCCCTA CTGCGCTGCC ACGGCCAATG TTTGTCAGTC GATTCAATCC TTTGCGCCTT GGCTGCAAGC CACGCAAGTT AACTTAATAC GTTATAACAA CTTAGGTTAC AGCACGGATT ATGGTGTTGA TATGCAGCTA ATGGCCCGCC ATGCGGCTTT ACCTGTGTAT CAGTTAGAAA CCGCCGAGTC GCAATTTCAG TTATTAGCGT CCTTTGATAG CCAAGCACAG TGGACTATGG TGCGTGAGGC CATTAGTACG TCGGATGCCG ATCTTTTATC GTTAATTACG GCTTGGCGGT CGGGTAATGA AGCTGAGCTT GATAGCATAA TGCAGGAGCA AATGGGCGGC GAGGGCGACA CTGAGATGCT AGAGAAAATC CTCTGGCGGC GAAACCATGT GATGGCCGAC GGCATTATAA AGTTAATGGG CTCGACTGAA ATAACTTCAC CATTATTTGT AGTGGTTGGC GCGGGTCATG TGGTGGGTGA TAAAAGTGTG GTGCAATTGC TAGAACAAGC AGGCGCCAAA GTTAGCGCCT GCTGGAAACA GGCTTGCCAG TAA
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Protein sequence | MATSQWRLIA SICFLALTGW STKAVSAETD KPPFYQVQWQ GKSAYLLGSI HIGRADFYPL PTPIETALGK AKGLVVEVDM NKADSNALLR QYGRADKTKG LDWQSRDKQT VESMTPYCAA TANVCQSIQS FAPWLQATQV NLIRYNNLGY STDYGVDMQL MARHAALPVY QLETAESQFQ LLASFDSQAQ WTMVREAIST SDADLLSLIT AWRSGNEAEL DSIMQEQMGG EGDTEMLEKI LWRRNHVMAD GIIKLMGSTE ITSPLFVVVG AGHVVGDKSV VQLLEQAGAK VSACWKQACQ
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