| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3787 |
|---|
| Symbol | |
|---|
| ID | 5370046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4499169 |
|---|
| End bp | 4501577 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640832048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001367974 |
|---|
| Protein GI | 153002293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCC AAAGTTTAGC CTTAGCCTTA TCCATAGCGC TGTTAGGATT TCCCACCGTT
ACCGTCGCAG CAGCCGCGCC TAGTGCCAAG ATTATTAAGC AAAGCCAAGA GGCGAAAGGG
TTTCTTAATC TCTATTACGA GGAATCTCAG GGAGAGTTGT ACCTTGAGGT CAATCGCTTA
AATCAGCCTT TTCTCTTGGT CACTAGTTTG CCGCAGGGTG TAGGTTCGAA CGACATTGGT
CTCGATCGTG GCCAACTGGG TCAGACCCGC ATGGTGCAGT TTGAGCGCCA AGGTCCCTAT
ATTTTACTCA AGCAACTCAA TACCCAATAT CGTGCGAATA CCACTGACGC CGCCGAGCAA
AGAGCGGTTG CAGAAGCCTT TGCCGATTCA GTGCTATGGC AAGGCAAAGT GATTGAGGGC
AAGCCAGATC TGGTGGCAGT CAACGATCTG GTCCTCAATG ATTTACACGG TGTGGCTTCC
GTTTTGCAAC AAACAGAGCA GGGCAATTAT CAGCTAGATC TGAGCCGTTC TGTCATTTTG
CCCAAAGGGA TTAAATCCTT TGAGAAAAAC GCCGATGTCG ATGTGCAACT CACCTTTAAA
GGCGATGTTG CTGGCGTGCA GGTCGCACAG GTAACACCCG ATGGCACCTT AATGTCGGTG
CGGATGCGTT ATTCCTTTGT TGAGCTGCCC GATACTGATT ATCAGCCGCG GGCTTATCAT
CCGATGAGTG GTTATTTGTC AGATGAGTAT CAAGACTATG CGACGCCCTT TGACCAACCG
TTAGCTCAGC GTTTTATCCT GCGCCACCGT TTACAGAAAG TGAATCCAGG CCCTGCGCCA
AGTGAAGTCG TTAAACCTAT TACTTATTAT CTTGATCCCG GTGTGCCAGA ACCGATACGT
TCGGCGTTGC TCGATGGCGC GCGCTGGTGG GAGACGGCTT TTACTCGCGC CGGATTTATC
AACGGCTTTA AAGTTGAGTT ATTGCCGGTA GATGCCGATC CGCAGGATAT TCGCTACAAC
ATGATCCAAT GGGTGCACAG GGCGACGCGG GGTTGGTCCT ATGGCGCCGC ACTGACCGAT
CCACGCACAG GTGAAATCAT TAAGGGTCAA GTCACGCTCG GCAGCTTGCG TGTGCGGCAG
GATTACTTGA TTGCCAAAGG CTTAACCGCA GGCTGGCAGG ATAGAGTGGC GGCCGAGAAA
GCGGCGACAG CCTTATCGCT GGCGCGTATT CGCCAACTGG CCGCCCATGA AGTCGGCCAT
ACCTTAGGGC TAGATCATAA CTTTGCCGCT TCGACAAATC AGGATGCCTC TGTGATGGAT
TATCCCCATC CGAAAATCCT GCTAAAGGGC AATGATATTG ATATTTCAGC ACCTTACACT
ACAGGTGTTG GCCCTTGGGA TGATTTTGCT ATCGCCTATG GTTATAGCGA ACAAGGTGAT
GCCCGTACCC AACAAGCACT GCAAGTCGAC TTACTGGCCG ATGTGGCGAA ACGTGGCTTA
CGTTATATCG GTGAGGCCGA TTCTCGCCAA AAGGATGCGA GTCAGGCCTA TGCCAGTTTG
TGGGATAGTG GTGACGATCC GATCGAGCAA CTAGGTAAGC TCGACAAAAT TCGCACTAAG
GCGATTGCGG GTTTCTCTAG TGCGGCTTTG TTACCCAATG AGCCACTGGG CGAGCTAGCG
GATGCCTTTG CGCCAATTTA TTTGCTGACG CGTTATCAAA TCGATGCGGT TGCTAAGTTT
ATTGGCGGCA CTGACTATAA CTATCAATCC ATAGGTGAAG GCAGCCGCTG GAGCTATATT
GCGCCGCAGT TGCAGTTAAC AGGTTTAGAC GCACTGCTTA AAACCTTAGA TGCGGCGAGT
TTAACTGTGC CGCAAATCTT GCTCGACAGT TTAGTGCCAA AGGCGGGGAA TTATCATGCT
ACGCGGGAAT CCTTCGACTC AGGTTTAGGC GCAATTAACG ATCCTCTCGG TATGGCTGAA
GTATTTAGCC GTCATACCGT GAGCTTGCTA TTGATGCCTA AACGTTTGAA TCGTGTCAGC
CAAGCATCCA TGGCGGATAG CGAGCAGTTA TCGGTGACGA CATTACTGGA TAAGTTATTC
GCGGCGACCT TGTATCAAGA GGACAAGCTT GGGCTGGTCG AAGGCGTGTG GATGCGAGTG
AACGCTGTGG TGATTGATGA AGTGCTGGCA ACGCTGCACA ATCCTCAAAC CTCACCAGAG
GTGAGGGCTG CGATCAACGA TCGCGCTCAG TTTGTGATTA AGCAATTGAA AGCGAAGTCG
AATCGAGCGA ATGCAAGTCT TGCGGCCCAT TATACTTGGT TGCAACAGGG TCTGGCTGCG
GGCTTAACCG ATGCTAAGGT TAAGCTGATT TCTAAGCCAT TGACCTTACC GCCGGGATCG
CCGATTTAA
|
|---|
| Protein sequence | MKPQSLALAL SIALLGFPTV TVAAAAPSAK IIKQSQEAKG FLNLYYEESQ GELYLEVNRL
NQPFLLVTSL PQGVGSNDIG LDRGQLGQTR MVQFERQGPY ILLKQLNTQY RANTTDAAEQ
RAVAEAFADS VLWQGKVIEG KPDLVAVNDL VLNDLHGVAS VLQQTEQGNY QLDLSRSVIL
PKGIKSFEKN ADVDVQLTFK GDVAGVQVAQ VTPDGTLMSV RMRYSFVELP DTDYQPRAYH
PMSGYLSDEY QDYATPFDQP LAQRFILRHR LQKVNPGPAP SEVVKPITYY LDPGVPEPIR
SALLDGARWW ETAFTRAGFI NGFKVELLPV DADPQDIRYN MIQWVHRATR GWSYGAALTD
PRTGEIIKGQ VTLGSLRVRQ DYLIAKGLTA GWQDRVAAEK AATALSLARI RQLAAHEVGH
TLGLDHNFAA STNQDASVMD YPHPKILLKG NDIDISAPYT TGVGPWDDFA IAYGYSEQGD
ARTQQALQVD LLADVAKRGL RYIGEADSRQ KDASQAYASL WDSGDDPIEQ LGKLDKIRTK
AIAGFSSAAL LPNEPLGELA DAFAPIYLLT RYQIDAVAKF IGGTDYNYQS IGEGSRWSYI
APQLQLTGLD ALLKTLDAAS LTVPQILLDS LVPKAGNYHA TRESFDSGLG AINDPLGMAE
VFSRHTVSLL LMPKRLNRVS QASMADSEQL SVTTLLDKLF AATLYQEDKL GLVEGVWMRV
NAVVIDEVLA TLHNPQTSPE VRAAINDRAQ FVIKQLKAKS NRANASLAAH YTWLQQGLAA
GLTDAKVKLI SKPLTLPPGS PI
|
|---|
| |