Gene Shew185_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3622 
Symbol 
ID5370484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4301058 
End bp4302014 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID640831880 
Producthypothetical protein 
Protein accessionYP_001367810 
Protein GI153002129 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACC TCAATCTCAC TAAAGCCAGT CTATTGGTTT CGACACTCTA TTTAGGTTTG 
ATGGGCAATG TGTTCGCAGC GCAAAGCGTT GATAAACAGC TTAGTATTGG CAGCGACACC
CAACTGCAGA TCAAAGTCCA GCGCGGCGAT GTGACGATTC AAACCTGGGA TAAGAGTGAA
GTCAGTGTCA CAGGCACACT CGATGAATTG AGTCAAGGTT TTGTGTTCGA GCAACAGGGA
AACAGTCTGA ATATCGAAGA CAAAATGCCC CGCCACTACA ATGGCAGTAA TGACAAAGGC
TCGCAGCTCA CCATTAAAGT GCCAAAGACA GTAAAACTCA GTGCAGATAC TATTTCAGCA
AATCTGCAAG TCGCCGAAGC CCAAGGTGAA CTCGATTTGA ATACCGTCAG TGGCGATATC
AAAGCTAACA ACCTTAGTGG TAAACCTGAG TTGCACACAG TCTCAGGCGA CATCATCACT
CAAGCACTCG ATGGTAAAGT GAAATTAGAG ACAGTATCAG GCACGATTCA AGACACTGAC
AGTAAAGGGG AAATGAACTA TCGCCTCGTA AGTGGTGACT TAAAAAGTCA AACTCAGGCC
GAAAAAGTGA TGGTTGAACA AGTTTCTGGC GAAGTGAATG CTAACTTTAG CCTCGCTAAG
GAAATCGTAC TCAGAACCGT CAGCGGTGAC TCAAAAGTGT CACTGGCGAA AAACTTCAAC
AGAGCCAATT TAGAAAGTGT GAGTGGCGAT ATCATAGTGA CTTTTGCCGA TATGCCGGAT
GCCAGCTTTG ACTTAGACGG CGGACCAGGT GGCAAGATCA AAAATACCTT AACCCAAGAT
GAACCTAAAA AGCAGAAATA CGTGCCACGC GCCGAGCTGT CATTCCAAAC AGGTTCGGGA
GCTGCCAGTG TAAAAATGAA CACTATCAGC GGTGACTTGG TTTTAAAGAA GCAGTAA
 
Protein sequence
MSNLNLTKAS LLVSTLYLGL MGNVFAAQSV DKQLSIGSDT QLQIKVQRGD VTIQTWDKSE 
VSVTGTLDEL SQGFVFEQQG NSLNIEDKMP RHYNGSNDKG SQLTIKVPKT VKLSADTISA
NLQVAEAQGE LDLNTVSGDI KANNLSGKPE LHTVSGDIIT QALDGKVKLE TVSGTIQDTD
SKGEMNYRLV SGDLKSQTQA EKVMVEQVSG EVNANFSLAK EIVLRTVSGD SKVSLAKNFN
RANLESVSGD IIVTFADMPD ASFDLDGGPG GKIKNTLTQD EPKKQKYVPR AELSFQTGSG
AASVKMNTIS GDLVLKKQ