Gene Shew185_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3510 
Symbol 
ID5371776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4176239 
End bp4176964 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content47% 
IMG OID640831770 
ProductPepSY-associated TM helix 
Protein accessionYP_001367700 
Protein GI153002019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCGGG TTAACACACT TAAACGAGTC TCATCGGCGC ACTTTCTGCA CAGATGGTTG 
ATGCTATTGC TGGTACTGCC GATTGGGATC TGGTCAGTCA CCGGCAGCTA TTTCGTCTTA 
ATGGATCTTG GGTTTATCCG TGGCGATCAT ATTAAAGAAC AATACTCCCA GCATATCGAT 
CCCAGCCAGA TCCATTACCC AATGGCAGCG GTTTATGAAC GTTTCCCCAA GGCTCAAGCA 
ATCACGTTAA CCTCAGTTAC TGATACCCTC TACTACCGGA TTAAACTGAA CGATAAGTCC 
ATTCTCGTGA ACGCAGATTC GGGTGAGTTA TTGCCTTCAA TAACGGAGAA ACAAGCCCGA 
ATGATAGCTT CAAACTATCA GCATCACGGG TCTTTAGCCG TCGAGGCTAA GCTTGTTAGT 
GCAACCCTGT TCACCGATAT CGCCCCTGCA GAATTAGCGC CGCGATACTT GCCAGTTTGG 
AGAATGGATT TTAACGATAG CGCTGCTACA AGCCTTTACC TATCAGCGAC AACGGGAGAG 
TTAGTCACGC GTAGACATGA CTATTGGCGT TTATTCGATC TCTTTTGGAA ATGGCACATT 
ATGGATTACG ACGAAGGTGA AGCCATCGAC AATCTTCTAC TACTGAGCAC GGCTCTAGTC 
TCTATTGTGG CTGTATTAGC TGGCTTCGTT TTACTTTGGC AGCGCAGAAG GAGGTATCTG 
AGATGA
 
Protein sequence
MKRVNTLKRV SSAHFLHRWL MLLLVLPIGI WSVTGSYFVL MDLGFIRGDH IKEQYSQHID 
PSQIHYPMAA VYERFPKAQA ITLTSVTDTL YYRIKLNDKS ILVNADSGEL LPSITEKQAR 
MIASNYQHHG SLAVEAKLVS ATLFTDIAPA ELAPRYLPVW RMDFNDSAAT SLYLSATTGE 
LVTRRHDYWR LFDLFWKWHI MDYDEGEAID NLLLLSTALV SIVAVLAGFV LLWQRRRRYL 
R