| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3349 |
|---|
| Symbol | |
|---|
| ID | 5369851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3992843 |
|---|
| End bp | 3993685 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640831608 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001367539 |
|---|
| Protein GI | 153001858 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA CAAATCAAAT GATTTTTGAA CGTGATGGCT ATCAACTCAA GGTAGAGCAG
TTTGGTCAAG GCCCAAACCT ACTTGTGATT GGTTGTGTCG ACTATTACAA GAAAGTTATG
CCACAGACAT TACACAATCA TTTTACCTGT CTGTATCTAG ACCACCGAGG TTTTGCCTTA
CATGATGGTG TTGATAGCCC TATAAATTTG GAGGTAATTT CTAGCGACAT TGAGCATATC
TGTCAGCATC TCAATATCAA GAGTGCCTCT GTGTTCGGAC ATTCAGGACA TGCGTATATG
GCTATTCACT TTGCAAACCA GACAAGCCTT ATTATTGATA AAGTCATTGT AGTTGGTGCT
GCACCAAGTT TATCGAGGGG CATGCAAGAA AAACAGTTCG CCCATTGGTC CCAAAATGCA
TCTGAAGAGC GACGGAAGTT ACTAGAAAAA AATATGGCAA TGCTTGAGAG CGACATTACT
AATGAACCTG AACGAAAGTT TGTTCATATT TGTCGAAGAT TAGGTCCTAT GAGATGGGCT
GATCCAAAAT TTGATGAATT GGAACTTTGG ATGGGAGTAG AAACTAATAC GGTATTACTT
GATAAACTAT GGGGTGAACT ATTTCGCGAT ATAGACCTAA CTATATTGTC AAATAACCTA
AACTTGACAG TGATTAATGG CTCATTAGAT TTCAGTATTG CACCGTTGCA TACATGGCAA
TGCTTCAAGT CAGCATTTAA GTCACTCAAG TTGATAGAGT TAAAAGGTGT ATCTCACACT
CCGATGCTTG AGTGCCCAGA AAAGTTCGTT GATACGATGG CGAAGATTCA AAGAACGCGC
TGA
|
|---|
| Protein sequence | MNNTNQMIFE RDGYQLKVEQ FGQGPNLLVI GCVDYYKKVM PQTLHNHFTC LYLDHRGFAL
HDGVDSPINL EVISSDIEHI CQHLNIKSAS VFGHSGHAYM AIHFANQTSL IIDKVIVVGA
APSLSRGMQE KQFAHWSQNA SEERRKLLEK NMAMLESDIT NEPERKFVHI CRRLGPMRWA
DPKFDELELW MGVETNTVLL DKLWGELFRD IDLTILSNNL NLTVINGSLD FSIAPLHTWQ
CFKSAFKSLK LIELKGVSHT PMLECPEKFV DTMAKIQRTR
|
|---|
| |