| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3347 |
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| Symbol | |
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| ID | 5370097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3988112 |
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| End bp | 3989674 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831606 |
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| Product | ABC transporter related |
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| Protein accession | YP_001367537 |
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| Protein GI | 153001856 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.318773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATC GTCCCCAAGA TTACGCCGCC ATAAAACACT TAATACCTGT TGCCTGCGGT
TGGGCTGTGG CGGCCATATT GGAAGCGGCA TGCTACATTC AACTGGCTTT AGCCATTATT
GAGCAGCAAT CACCACAAAT AGTGCTATTC ATTGCCGCGA TAACCATACT CACCACAATA
CTGGCTTCGC GTTCTGGTTT TTGGGCTGGC GCAAGGCTAG CTAATGCGCT CTACAGTGCC
CTAGGCGCGA CTATGCAACA AGCTAAGCTC TCTTGGTTTA CAGCCAGTGT CAGGACACTA
CTCATAGAAA CCGTCTCTCG GAGTATTCCT GGCTTTATGA GTATTCCGGC ACATCAATTT
CAGGTCTTTA TTCATGCACC GCTTATTCCG CTCTGCATTA CTTTCGGCAT CGGATTGATC
GGTGGCATAC CACTGGTAAT GATGTTGGCT AGCTTGTTGC TCATATCATT TGTGATTCAG
AGTATGGCGC AACGGGCCCT TGCCCGCGCA GATATGGACC GAAACAACGC TGAACTGGCA
ACGAATCAAT CCACTCTTGA ACTTATAGAT CACGTAGAAT TACTCCGTAC AGCAGCGGGA
TACAATCGTG CGACCGAGCG TTTAGAGCAA AACTGGCAGG CGCAAGAAAT CGCACTGGGT
CGAACTAATC GCGCCGCCGC TATAGCAACA TTACTGTCGG CTATCGCCAG CTTTTTACCT
ATTGCCGGCA TGGCTCTCTA TCTCGTGTTA TCAGGCGTAA ACAATACGAC AATGCTGCTC
GCTGTCTTGA TGTTGACCAT GCGCGCATCA GCGCCACTTG AGACTCTCGC CGTGGCGGCA
ATAGGCATTA ATGATCAGTT AGCGGCTATT AAACACTATC GACAAGCGAC TAATGCGCCA
ACGCTCAAAG AGCCAAGCCA AGCGCAACAA AAGACACCGC ACAATCATAC AATCGAACTG
AATAACGTAA CATTTCCCCC TGCGGTGCAA AATATCAATG CCATTATCGA ACCAGGTGAA
CGCGTACTGA TTTGTGGCCC TAGCGGTTCT GGAAAAACAA CCCTACTTAA GCTATTAATG
CGCTTTGATG ATCCCACCCT AGGCCTGATC AATTTGGGCA AGGTACCACT CACGTCAATC
CCTGCTGCTG AACTTGCCCG CTTTTTCGCC TATGTGCCGC AGGATCCACT CATCTTTACA
GGCACCATTG CCAGTAATAT TCGCATTGGT AACCCTGATG CCGACGATCA AGCCGTAGAT
AAAGCGGCAC GCCAAGTGGC ACTGGATGAA GTATTAGACA GATCAGAACT GGGCATATAC
CAAGAAGTCG GCTTACAAGG TGCGGGGTTA TCGGGAGGGG AACGCCAAAG GCTTGCCTTA
GCACGCGCGC TTATCAAAAA TGCATCGATT CTGATAATGG ATGAGGCCAC CTCGGCATTG
GATGAGGAGA CGGAAAAGCG CGTTGCCAAA GCTATTTGCG AACAAAGCTG CACACTGGTT
GTCGTTTCGC ACCGAAACCA ATCAGTTTGG CAGCCAACTC ACATTATAGA ATTTGCTCAA
TAG
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| Protein sequence | MINRPQDYAA IKHLIPVACG WAVAAILEAA CYIQLALAII EQQSPQIVLF IAAITILTTI
LASRSGFWAG ARLANALYSA LGATMQQAKL SWFTASVRTL LIETVSRSIP GFMSIPAHQF
QVFIHAPLIP LCITFGIGLI GGIPLVMMLA SLLLISFVIQ SMAQRALARA DMDRNNAELA
TNQSTLELID HVELLRTAAG YNRATERLEQ NWQAQEIALG RTNRAAAIAT LLSAIASFLP
IAGMALYLVL SGVNNTTMLL AVLMLTMRAS APLETLAVAA IGINDQLAAI KHYRQATNAP
TLKEPSQAQQ KTPHNHTIEL NNVTFPPAVQ NINAIIEPGE RVLICGPSGS GKTTLLKLLM
RFDDPTLGLI NLGKVPLTSI PAAELARFFA YVPQDPLIFT GTIASNIRIG NPDADDQAVD
KAARQVALDE VLDRSELGIY QEVGLQGAGL SGGERQRLAL ARALIKNASI LIMDEATSAL
DEETEKRVAK AICEQSCTLV VVSHRNQSVW QPTHIIEFAQ
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